Genome Meta Information: Corynebacterium coyleae DSM 44184 (GCA_900105505.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900105505.1 | ||
| HOMD Taxon-ID | HMT-0341 | ||
| Species Name (in use by HOMD) | Corynebacterium coyleae | ||
| Organism Name (as deposited) | HMT-341 Corynebacterium coyleae DSM 44184 | ||
| Strain or Isolate | DSM 44184 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium coyleae |
||
| Sequencing Technology | PacBio RS | ||
| Genome Coverage | 1084 | ||
| Contigs |
|
||
| Total Sequence Length | 2,568,936 (bp) | ||
| GC Percentage | 61.32 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/505/GCA_900105505.1_IMG-taxon_2634166170_annotated_assembly | ||
| CDS | 2403 | ||
| Genes | 2477 | ||
| mRNA | 2477 | ||
| misc RNA | 9 | ||
| rRNA | 12 | ||
| tRNA | 52 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 97.84 % | ||
| CheckM Contamination | 2.26 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | IMG-taxon 2634166170 annotated |
| GenBank Assembly Accession | GCA_900105505.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900105505.1 [NCBI] |
| BioSample | SAMN04488531 [NCBI] |
| BioProject | PRJEB16385 [NCBI] |
| Submitter | DOE - JOINT GENOME INSTITUTE |
| Submission Date | 2016-02-11T18:36:49.000 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | FNRU01 |
| NCBI TaxID | 53374 |
| Isolation Source | |
| Geo Location | missing |
