Genome Meta Information: Neisseria elongata ATCC 25295 (GCA_900113545.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900113545.1 | ||
| HOMD Taxon-ID | HMT-0598 | ||
| Species Name (in use by HOMD) | Neisseria elongata | ||
| Organism Name (as deposited) | HMT-598 Neisseria elongata ATCC 25295 | ||
| Strain or Isolate | ATCC 25295 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria elongata |
||
| Sequencing Technology | Illumina HiSeq 2500-1TB | ||
| Genome Coverage | 628 | ||
| Contigs |
|
||
| Total Sequence Length | 2,360,727 (bp) | ||
| GC Percentage | 53.87 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/545/GCA_900113545.1_IMG-taxon_2675903696_annotated_assembly | ||
| CDS | 2209 | ||
| Genes | 2276 | ||
| mRNA | 2276 | ||
| misc RNA | 12 | ||
| rRNA | 3 | ||
| tRNA | 51 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 98.97 % | ||
| CheckM Contamination | 1.1 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | IMG-taxon 2675903696 annotated |
| GenBank Assembly Accession | GCA_900113545.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900113545.1 [NCBI] |
| BioSample | SAMN05421815 [NCBI] |
| BioProject | PRJEB17337 [NCBI] |
| Submitter | DOE - JOINT GENOME INSTITUTE |
| Submission Date | 2016-07-20T20:53:55.380 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | FOPS01 |
| NCBI TaxID | 214482 |
| Isolation Source | missing |
| Geo Location | missing |
