Genome Meta Information: Peptostreptococcus anaerobius C (GCA_900115025.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900115025.1 | ||
| HOMD Taxon-ID | HMT-0542 | ||
| Species Name (in use by HOMD) | Peptostreptococcus anaerobius | ||
| Organism Name (as deposited) | HMT-542 Peptostreptococcus anaerobius C | ||
| Strain or Isolate | C | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Peptostreptococcus; s__Peptostreptococcus anaerobius |
||
| Sequencing Technology | Illumina HiSeq 2000,Illumina HiSeq 2500 | ||
| Genome Coverage | 603 | ||
| Contigs |
|
||
| Total Sequence Length | 2,116,810 (bp) | ||
| GC Percentage | 35.71 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/025/GCA_900115025.1_IMG-taxon_2593339272_annotated_assembly | ||
| CDS | 1935 | ||
| Genes | 2054 | ||
| mRNA | 2054 | ||
| misc RNA | 60 | ||
| rRNA | 5 | ||
| tRNA | 53 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.98 % | ||
| CheckM Completeness | 97.67 % | ||
| CheckM Contamination | 3.58 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | IMG-taxon 2593339272 annotated |
| GenBank Assembly Accession | GCA_900115025.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900115025.1 [NCBI] |
| BioSample | SAMN05660467 [NCBI] |
| BioProject | PRJEB17122 [NCBI] |
| Submitter | DOE - JOINT GENOME INSTITUTE |
| Submission Date | 2016-08-25T14:31:26.957 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | FOVA01 |
| NCBI TaxID | 1261 |
| Isolation Source | missing |
| Geo Location | missing |
