Genome Meta Information: Segatella oulorum ATCC 43324 (GCA_900167385.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900167385.1 | ||
| HOMD Taxon-ID | HMT-0288 | ||
| Species Name (in use by HOMD) | Segatella oulorum | ||
| Organism Name (as deposited) | HMT-288 Segatella oulorum ATCC 43324 | ||
| Strain or Isolate | ATCC 43324 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella oulorum |
||
| Sequencing Technology | Illumina HiSeq 2000,Illumina HiSeq 2500 | ||
| Genome Coverage | 363 | ||
| Contigs |
|
||
| Total Sequence Length | 2,840,943 (bp) | ||
| GC Percentage | 46.93 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/385/GCA_900167385.1_IMG-taxon_2585428083_annotated_assembly | ||
| CDS | 2503 | ||
| Genes | 2565 | ||
| mRNA | 2565 | ||
| misc RNA | 9 | ||
| rRNA | 2 | ||
| tRNA | 50 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.94 % | ||
| CheckM Completeness | 98.46 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | IMG-taxon 2585428083 annotated |
| GenBank Assembly Accession | GCA_900167385.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900167385.1 [NCBI] |
| BioSample | SAMN02745202 [NCBI] |
| BioProject | PRJEB19556 [NCBI] |
| Submitter | DOE - JOINT GENOME INSTITUTE |
| Submission Date | 2014-05-05T22:55:21.576 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | FUXK01 |
| NCBI TaxID | 28136 |
| Isolation Source | |
| Geo Location | United Kingdom |
