Genome Meta Information: Haemophilus pittmaniae NCTC13334 (GCA_900186995.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900186995.1 | ||
| HOMD Taxon-ID | HMT-0946 | ||
| Species Name (in use by HOMD) | Haemophilus pittmaniae | ||
| Organism Name (as deposited) | HMT-946 Haemophilus pittmaniae NCTC13334 | ||
| Strain or Isolate | NCTC13334 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Haemophilus_D; s__Haemophilus_D pittmaniae |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 537 | ||
| Contigs |
|
||
| Total Sequence Length | 2,181,355 (bp) | ||
| GC Percentage | 42.52 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/995/GCA_900186995.1_50465_A02 | ||
| CDS | 1982 | ||
| Genes | 2062 | ||
| mRNA | 0 | ||
| misc RNA | 0 | ||
| rRNA | 20 | ||
| tRNA | 59 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.92 % | ||
| CheckM Completeness | 99.16 % | ||
| CheckM Contamination | 1.82 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 50465_A02 |
| GenBank Assembly Accession | GCA_900186995.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900186995.1 [NCBI] |
| BioSample | SAMEA4384241 [NCBI] |
| BioProject | PRJEB6403 [NCBI] |
| Submitter | SC |
| Submission Date | 2017-01-19T14:06:50.956 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 249188 |
| Isolation Source | blood |
| Geo Location | Brazil |
