Genome Meta Information: Prevotella jejuni DSM 26989 (GCA_900187995.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900187995.1 | ||
| HOMD Taxon-ID | HMT-0313 | ||
| Species Name (in use by HOMD) | Prevotella jejuni | ||
| Organism Name (as deposited) | HMT-313 Prevotella jejuni DSM 26989 | ||
| Strain or Isolate | DSM 26989 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella jejuni |
||
| Sequencing Technology | Illumina HiSeq 2500-1TB | ||
| Genome Coverage | 286 | ||
| Contigs |
|
||
| Total Sequence Length | 3,646,938 (bp) | ||
| GC Percentage | 41.76 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/995/GCA_900187995.1_IMG-taxon_2724679806_annotated_assembly | ||
| CDS | 2898 | ||
| Genes | 2955 | ||
| mRNA | 2955 | ||
| misc RNA | 8 | ||
| rRNA | 2 | ||
| tRNA | 46 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 98.93 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | IMG-taxon 2724679806 annotated |
| GenBank Assembly Accession | GCA_900187995.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900187995.1 [NCBI] |
| BioSample | SAMN06265364 [NCBI] |
| BioProject | PRJEB21399 [NCBI] |
| Submitter | DOE - JOINT GENOME INSTITUTE |
| Submission Date | 2017-01-25T05:48:52.653 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | FZNZ01 |
| NCBI TaxID | 1177574 |
| Isolation Source | missing |
| Geo Location | missing |
