Genome Meta Information: Pseudomonas fluorescens ATCC 13525 (GCA_900215245.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900215245.1 | ||
| HOMD Taxon-ID | HMT-0612 | ||
| Species Name (in use by HOMD) | Pseudomonas fluorescens | ||
| Organism Name (as deposited) | HMT-612 Pseudomonas fluorescens ATCC 13525 | ||
| Strain or Isolate | ATCC 13525 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E; s__Pseudomonas_E fluorescens |
||
| Sequencing Technology | PacBio RS,PacBio RS II | ||
| Genome Coverage | 37 | ||
| Contigs |
|
||
| Total Sequence Length | 6,511,547 (bp) | ||
| GC Percentage | 59.99 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/215/245/GCA_900215245.1_IMG-taxon_2617270901_annotated_assembly | ||
| CDS | 5879 | ||
| Genes | 6077 | ||
| mRNA | 6077 | ||
| misc RNA | 109 | ||
| rRNA | 19 | ||
| tRNA | 69 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 99.63 % | ||
| CheckM Contamination | 0.62 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | IMG-taxon 2617270901 annotated |
| GenBank Assembly Accession | GCA_900215245.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900215245.1 [NCBI] |
| BioSample | SAMN04488487 [NCBI] |
| BioProject | PRJEB22404 [NCBI] |
| Submitter | DOE - JOINT GENOME INSTITUTE |
| Submission Date | 2016-02-11T18:31:03.000 |
| Assembly Method | |
| Assembly Level | Chromosome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 294 |
| Isolation Source | |
| Geo Location | missing |
