Genome Meta Information: Aerococcus viridans NCTC8251 (GCA_900445095.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900445095.1 | ||
| HOMD Taxon-ID | HMT-0312 | ||
| Species Name (in use by HOMD) | Aerococcus viridans | ||
| Organism Name (as deposited) | HMT-312 Aerococcus viridans NCTC8251 | ||
| Strain or Isolate | NCTC8251 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Aerococcaceae;g__Aerococcus; s__Aerococcus viridans |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,265,362 (bp) | ||
| GC Percentage | 39.39 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/445/095/GCA_900445095.1_48290_F02 | ||
| CDS | 2085 | ||
| Genes | 2219 | ||
| mRNA | 2219 | ||
| misc RNA | 37 | ||
| rRNA | 24 | ||
| tRNA | 71 | ||
| tmRNA | 2 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 98.03 % | ||
| CheckM Contamination | 2.77 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 48290_F02 |
| GenBank Assembly Accession | GCA_900445095.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900445095.1 [NCBI] |
| BioSample | SAMEA4040026 [NCBI] |
| BioProject | PRJEB6403 [NCBI] |
| Submitter | SC |
| Submission Date | 2016-10-06T12:12:42.183 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | UFSK01 |
| NCBI TaxID | 1377 |
| Isolation Source | Air of an occupied school room |
| Geo Location | |
