Genome Meta Information: Campylobacter sputorum NCTC12474 (GCA_900446595.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900446595.1 | ||
| HOMD Taxon-ID | HMT-0776 | ||
| Species Name (in use by HOMD) | Campylobacter sputorum | ||
| Organism Name (as deposited) | HMT-776 Campylobacter sputorum NCTC12474 | ||
| Strain or Isolate | NCTC12474 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter_F; s__Campylobacter_F sputorum |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 1,767,425 (bp) | ||
| GC Percentage | 29.71 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/446/595/GCA_900446595.1_56931_D02 | ||
| CDS | 1767 | ||
| Genes | 1828 | ||
| mRNA | 1828 | ||
| misc RNA | 5 | ||
| rRNA | 8 | ||
| tRNA | 47 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.98 % | ||
| CheckM Completeness | 97.84 % | ||
| CheckM Contamination | 0.25 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 56931_D02 |
| GenBank Assembly Accession | GCA_900446595.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900446595.1 [NCBI] |
| BioSample | SAMEA104167200 [NCBI] |
| BioProject | PRJEB6403 [NCBI] |
| Submitter | SC |
| Submission Date | 2017-11-24T10:21:10.670 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | UFVG01 |
| NCBI TaxID | 32023 |
| Isolation Source | not available: to be reported later |
| Geo Location | |
