Genome Meta Information: Neisseria flavescens NCTC8263 (GCA_900453805.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900453805.1 | ||
| HOMD Taxon-ID | HMT-0610 | ||
| Species Name (in use by HOMD) | Neisseria flavescens | ||
| Organism Name (as deposited) | HMT-610 Neisseria flavescens NCTC8263 | ||
| Strain or Isolate | NCTC8263 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria flavescens |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,291,788 (bp) | ||
| GC Percentage | 49.05 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/453/805/GCA_900453805.1_46338_A01 | ||
| CDS | 2250 | ||
| Genes | 2349 | ||
| mRNA | 2349 | ||
| misc RNA | 20 | ||
| rRNA | 12 | ||
| tRNA | 66 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 98.23 % | ||
| CheckM Contamination | 1.63 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 46338_A01 |
| GenBank Assembly Accession | GCA_900453805.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900453805.1 [NCBI] |
| BioSample | SAMEA3936792 [NCBI] |
| BioProject | PRJEB6403 [NCBI] |
| Submitter | SC |
| Submission Date | 2016-07-20T09:10:42.813 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | UGQV01 |
| NCBI TaxID | 484 |
| Isolation Source | not available: to be reported later |
| Geo Location | |
