Genome Meta Information: Peptoniphilus indolicus NCTC11088 (GCA_900454665.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900454665.1 | ||
| HOMD Taxon-ID | HMT-0840 | ||
| Species Name (in use by HOMD) | Peptoniphilus indolicus | ||
| Organism Name (as deposited) | HMT-840 Peptoniphilus indolicus NCTC11088 | ||
| Strain or Isolate | NCTC11088 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Tissierellales;f__Peptoniphilaceae;g__Peptoniphilus; s__Peptoniphilus indolicus |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,247,968 (bp) | ||
| GC Percentage | 31.58 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/454/665/GCA_900454665.1_51765_G01 | ||
| CDS | 2149 | ||
| Genes | 2238 | ||
| mRNA | 2238 | ||
| misc RNA | 36 | ||
| rRNA | 10 | ||
| tRNA | 42 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.86 % | ||
| CheckM Completeness | 97.98 % | ||
| CheckM Contamination | 2.96 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | No Pangenomes Available. | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 51765_G01 |
| GenBank Assembly Accession | GCA_900454665.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900454665.1 [NCBI] |
| BioSample | SAMEA4521465 [NCBI] |
| BioProject | PRJEB6403 [NCBI] |
| Submitter | SC |
| Submission Date | 2017-04-06T14:06:56.436 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | UGTH01 |
| NCBI TaxID | 33030 |
| Isolation Source | not available: to be reported later |
| Geo Location | |
