Genome Meta Information: Peptoniphilus harei NCTC13076 (GCA_900454685.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900454685.1 | ||
| HOMD Taxon-ID | HMT-0109 | ||
| Species Name (in use by HOMD) | Peptoniphilus harei | ||
| Organism Name (as deposited) | HMT-109 Peptoniphilus harei NCTC13076 | ||
| Strain or Isolate | NCTC13076 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Tissierellales;f__Peptoniphilaceae;g__Peptoniphilus_A; s__Peptoniphilus_A harei |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,168,934 (bp) | ||
| GC Percentage | 33.75 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/454/685/GCA_900454685.1_52278_A01 | ||
| CDS | 2140 | ||
| Genes | 2245 | ||
| mRNA | 2245 | ||
| misc RNA | 54 | ||
| rRNA | 9 | ||
| tRNA | 41 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.98 % | ||
| CheckM Completeness | 96.57 % | ||
| CheckM Contamination | 5.44 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 52278_A01 |
| GenBank Assembly Accession | GCA_900454685.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900454685.1 [NCBI] |
| BioSample | SAMEA4535753 [NCBI] |
| BioProject | PRJEB6403 [NCBI] |
| Submitter | SC |
| Submission Date | 2017-05-05T08:08:07.126 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | UATM01 |
| NCBI TaxID | 54005 |
| Isolation Source | Pus from sacral sore |
| Geo Location | United Kingdom |
