Genome Meta Information: Prevotella denticola NCTC13067 (GCA_900454835.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900454835.1 | ||
| HOMD Taxon-ID | HMT-0291 | ||
| Species Name (in use by HOMD) | Prevotella denticola | ||
| Organism Name (as deposited) | HMT-291 Prevotella denticola NCTC13067 | ||
| Strain or Isolate | NCTC13067 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella denticola |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 3,171,703 (bp) | ||
| GC Percentage | 49.94 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/454/835/GCA_900454835.1_52295_A01 | ||
| CDS | 2570 | ||
| Genes | 2645 | ||
| mRNA | 2645 | ||
| misc RNA | 8 | ||
| rRNA | 14 | ||
| tRNA | 52 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 97.85 % | ||
| CheckM Contamination | 1.27 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 52295_A01 |
| GenBank Assembly Accession | GCA_900454835.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900454835.1 [NCBI] |
| BioSample | SAMEA4535751 [NCBI] |
| BioProject | PRJEB6403 [NCBI] |
| Submitter | SC |
| Submission Date | 2017-05-05T08:08:07.046 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | UGTM01 |
| NCBI TaxID | 28129 |
| Isolation Source | Oral Cavity |
| Geo Location | |
