Genome Meta Information: Pseudomonas luteola NCTC11842 (GCA_900455515.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900455515.1 | ||
| HOMD Taxon-ID | HMT-0344 | ||
| Species Name (in use by HOMD) | Pseudomonas luteola | ||
| Organism Name (as deposited) | HMT-344 Pseudomonas luteola NCTC11842 | ||
| Strain or Isolate | NCTC11842 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_B; s__Pseudomonas_B luteola |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 6,089,776 (bp) | ||
| GC Percentage | 54.77 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/455/515/GCA_900455515.1_43251_F01 | ||
| CDS | 5843 | ||
| Genes | 6003 | ||
| mRNA | 6003 | ||
| misc RNA | 63 | ||
| rRNA | 24 | ||
| tRNA | 72 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.03 % | ||
| CheckM Completeness | 97.91 % | ||
| CheckM Contamination | 2 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 43251_F01 |
| GenBank Assembly Accession | GCA_900455515.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900455515.1 [NCBI] |
| BioSample | SAMEA3711441 [NCBI] |
| BioProject | PRJEB6403 [NCBI] |
| Submitter | SC |
| Submission Date | 2016-03-15T10:08:34.903 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | UAUF01 |
| NCBI TaxID | 47886 |
| Isolation Source | Gall Bladder |
| Geo Location | |
