Genome Meta Information: Staphylococcus cohnii NCTC7623 (GCA_900458845.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900458845.1 | ||
| HOMD Taxon-ID | HMT-0117 | ||
| Species Name (in use by HOMD) | Staphylococcus cohnii | ||
| Organism Name (as deposited) | HMT-117 Staphylococcus cohnii NCTC7623 | ||
| Strain or Isolate | NCTC7623 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus cohnii |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,672,175 (bp) | ||
| GC Percentage | 32.4 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/458/845/GCA_900458845.1_53750_H01 | ||
| CDS | 2585 | ||
| Genes | 2712 | ||
| mRNA | 2712 | ||
| misc RNA | 46 | ||
| rRNA | 19 | ||
| tRNA | 61 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.78 % | ||
| CheckM Completeness | 97.54 % | ||
| CheckM Contamination | 0.4 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 53750_H01 |
| GenBank Assembly Accession | GCA_900458845.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900458845.1 [NCBI] |
| BioSample | SAMEA101174668 [NCBI] |
| BioProject | PRJEB6403 [NCBI] |
| Submitter | SC |
| Submission Date | 2017-09-20T08:06:37.250 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | UHEC01 |
| NCBI TaxID | 29382 |
| Isolation Source | ice cream |
| Geo Location | United Kingdom |
