Genome Meta Information: Neisseria cinerea NCTC10294 (GCA_900475315.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900475315.1 | ||
| HOMD Taxon-ID | HMT-0956 | ||
| Species Name (in use by HOMD) | Neisseria cinerea | ||
| Organism Name (as deposited) | HMT-956 Neisseria cinerea NCTC10294 | ||
| Strain or Isolate | NCTC10294 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria cinerea |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 1,832,904 (bp) | ||
| GC Percentage | 50.9 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/475/315/GCA_900475315.1_43721_G02 | ||
| CDS | 1713 | ||
| Genes | 1811 | ||
| mRNA | 1811 | ||
| misc RNA | 25 | ||
| rRNA | 12 | ||
| tRNA | 60 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 97.39 % | ||
| CheckM Contamination | 0.2 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 43721_G02 |
| GenBank Assembly Accession | GCA_900475315.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900475315.1 [NCBI] |
| BioSample | SAMEA3714889 [NCBI] |
| BioProject | PRJEB6403 [NCBI] |
| Submitter | SC |
| Submission Date | 2016-04-09T15:13:21.560 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 483 |
| Isolation Source | nasopharynx |
| Geo Location | Germany |
