Genome Meta Information: Micrococcus luteus NCTC2665 (GCA_900475555.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900475555.1 | ||
| HOMD Taxon-ID | HMT-0087 | ||
| Species Name (in use by HOMD) | Micrococcus luteus | ||
| Organism Name (as deposited) | HMT-087 Micrococcus luteus NCTC2665 | ||
| Strain or Isolate | NCTC2665 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Micrococcaceae;g__Micrococcus; s__Micrococcus luteus |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,495,693 (bp) | ||
| GC Percentage | 73.0 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/475/555/GCA_900475555.1_44257_B01 | ||
| CDS | 2278 | ||
| Genes | 2350 | ||
| mRNA | 2350 | ||
| misc RNA | 12 | ||
| rRNA | 6 | ||
| tRNA | 53 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.98 % | ||
| CheckM Completeness | 98.7 % | ||
| CheckM Contamination | 0.23 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 44257_B01 |
| GenBank Assembly Accession | GCA_900475555.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900475555.1 [NCBI] |
| BioSample | SAMEA3867442 [NCBI] |
| BioProject | PRJEB6403 [NCBI] |
| Submitter | SC |
| Submission Date | 2016-04-27T09:12:14.380 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 465515 |
| Isolation Source | not available: to be reported later |
| Geo Location | United Kingdom: London |
