Genome Meta Information: Aggregatibacter segnis NCTC10977 (GCA_900476035.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900476035.1 | ||
| HOMD Taxon-ID | HMT-0762 | ||
| Species Name (in use by HOMD) | Aggregatibacter segnis | ||
| Organism Name (as deposited) | HMT-762 Aggregatibacter segnis NCTC10977 | ||
| Strain or Isolate | NCTC10977 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Aggregatibacter; s__Aggregatibacter segnis |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,022,832 (bp) | ||
| GC Percentage | 42.56 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/476/035/GCA_900476035.1_53694_C01 | ||
| CDS | 1880 | ||
| Genes | 1995 | ||
| mRNA | 1995 | ||
| misc RNA | 37 | ||
| rRNA | 19 | ||
| tRNA | 58 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 99.47 % | ||
| CheckM Contamination | 0.08 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 53694_C01 |
| GenBank Assembly Accession | GCA_900476035.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900476035.1 [NCBI] |
| BioSample | SAMEA87357418 [NCBI] |
| BioProject | PRJEB6403 [NCBI] |
| Submitter | SC |
| Submission Date | 2017-09-20T08:06:36.576 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 888057 |
| Isolation Source | Dental Plaque |
| Geo Location | Denmark: Aarhus |
