Genome Meta Information: Staphylococcus auricularis NCTC12101 (GCA_900478415.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900478415.1 | ||
| HOMD Taxon-ID | HMT-0331 | ||
| Species Name (in use by HOMD) | Staphylococcus auricularis | ||
| Organism Name (as deposited) | HMT-331 Staphylococcus auricularis NCTC12101 | ||
| Strain or Isolate | NCTC12101 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus auricularis |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 233 | ||
| Contigs |
|
||
| Total Sequence Length | 2,216,666 (bp) | ||
| GC Percentage | 37.38 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/478/415/GCA_900478415.1_35910_E02 | ||
| CDS | 2125 | ||
| Genes | 2244 | ||
| mRNA | 2244 | ||
| misc RNA | 42 | ||
| rRNA | 16 | ||
| tRNA | 60 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 93.66 % | ||
| CheckM Contamination | 1.36 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 35910_E02 |
| GenBank Assembly Accession | GCA_900478415.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900478415.1 [NCBI] |
| BioSample | SAMEA3233547 [NCBI] |
| BioProject | PRJEB6403 [NCBI] |
| Submitter | SC |
| Submission Date | 2015-05-13T13:09:23.930 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 29379 |
| Isolation Source | not available: to be reported later |
| Geo Location | |
