Genome Meta Information: Lawsonella clevelandensis USB-603019 (GCA_900610365.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900610365.2 | ||
| HOMD Taxon-ID | HMT-0173 | ||
| Species Name (in use by HOMD) | Lawsonella clevelandensis | ||
| Organism Name (as deposited) | HMT-173 Lawsonella clevelandensis USB-603019 | ||
| Strain or Isolate | USB-603019 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Lawsonella; s__Lawsonella clevelandensis |
||
| Sequencing Technology | Illumina Miseq | ||
| Genome Coverage | 254 | ||
| Contigs |
|
||
| Total Sequence Length | 1,877,010 (bp) | ||
| GC Percentage | 58.59 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/610/365/GCA_900610365.2_603019-18 | ||
| CDS | 1609 | ||
| Genes | 1668 | ||
| mRNA | 1668 | ||
| misc RNA | 6 | ||
| rRNA | 6 | ||
| tRNA | 46 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.61 % | ||
| CheckM Completeness | 98.32 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 603019-18 |
| GenBank Assembly Accession | GCA_900610365.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900610365.1 [NCBI] |
| BioSample | SAMEA5065507 [NCBI] |
| BioProject | PRJEB29478 [NCBI] |
| Submitter | University Hospital Basel |
| Submission Date | 2019-08-16T15:05:49.963 |
| Assembly Method | |
| Assembly Level | Chromosome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1528099 |
| Isolation Source | abscess breast |
| Geo Location | Switzerland |
