Genome Meta Information: Arachnia propionica NCTC11666 (GCA_900638645.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900638645.1 | ||
| HOMD Taxon-ID | HMT-0739 | ||
| Species Name (in use by HOMD) | Arachnia propionica | ||
| Organism Name (as deposited) | HMT-739 Arachnia propionica NCTC11666 | ||
| Strain or Isolate | NCTC11666 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Propionibacteriales;f__Propionibacteriaceae;g__Arachnia; s__Arachnia propionica |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 3,405,117 (bp) | ||
| GC Percentage | 66.31 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/638/645/GCA_900638645.1_58635_A02 | ||
| CDS | 2979 | ||
| Genes | 3062 | ||
| mRNA | 3062 | ||
| misc RNA | 24 | ||
| rRNA | 6 | ||
| tRNA | 52 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.43 % | ||
| CheckM Completeness | 95.42 % | ||
| CheckM Contamination | 1.64 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 3 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 58635_A02 |
| GenBank Assembly Accession | GCA_900638645.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900638645.1 [NCBI] |
| BioSample | SAMEA104307713 [NCBI] |
| BioProject | PRJEB6403 [NCBI] |
| Submitter | SC |
| Submission Date | 2018-04-21T08:06:00.056 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1750 |
| Isolation Source | eye |
| Geo Location | |
