Genome Meta Information: Brevundimonas diminuta NCTC9239 (GCA_901421975.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_901421975.1 | ||
| HOMD Taxon-ID | HMT-0590 | ||
| Species Name (in use by HOMD) | Brevundimonas diminuta | ||
| Organism Name (as deposited) | HMT-590 Brevundimonas diminuta NCTC9239 | ||
| Strain or Isolate | NCTC9239 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Brevundimonas; s__Brevundimonas diminuta |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 3,383,349 (bp) | ||
| GC Percentage | 67.35 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/901/421/975/GCA_901421975.1_34410_D01 | ||
| CDS | 3409 | ||
| Genes | 3485 | ||
| mRNA | 3485 | ||
| misc RNA | 15 | ||
| rRNA | 6 | ||
| tRNA | 54 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 93.8 % | ||
| CheckM Contamination | 2.26 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 34410_D01 |
| GenBank Assembly Accession | GCA_901421975.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_901421975.1 [NCBI] |
| BioSample | SAMEA3121333 [NCBI] |
| BioProject | PRJEB6403 [NCBI] |
| Submitter | SC |
| Submission Date | 2015-03-25T10:06:49.866 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1325724 |
| Isolation Source | blood |
| Geo Location | |
