Genome Meta Information: Neisseria lactamica NCTC10617 (GCA_901482445.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_901482445.1 | ||
| HOMD Taxon-ID | HMT-0649 | ||
| Species Name (in use by HOMD) | Neisseria lactamica | ||
| Organism Name (as deposited) | HMT-649 Neisseria lactamica NCTC10617 | ||
| Strain or Isolate | NCTC10617 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria lactamica |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,198,889 (bp) | ||
| GC Percentage | 52.12 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/901/482/445/GCA_901482445.1_45076_H02 | ||
| CDS | 1997 | ||
| Genes | 2090 | ||
| mRNA | 2090 | ||
| misc RNA | 20 | ||
| rRNA | 12 | ||
| tRNA | 60 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.98 % | ||
| CheckM Completeness | 99.04 % | ||
| CheckM Contamination | 0.3 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 45076_H02 |
| GenBank Assembly Accession | GCA_901482445.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_901482445.1 [NCBI] |
| BioSample | SAMEA3867448 [NCBI] |
| BioProject | PRJEB6403 [NCBI] |
| Submitter | SC |
| Submission Date | 2016-04-27T09:12:14.783 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 486 |
| Isolation Source | Nose |
| Geo Location | USA |
