Genome Meta Information: Neisseria sicca Neisseria_sicca_BgEED21 (GCA_901873385.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_901873385.1 | ||
| HOMD Taxon-ID | HMT-0764 | ||
| Species Name (in use by HOMD) | Neisseria sicca | ||
| Organism Name (as deposited) | HMT-764 Neisseria sicca Neisseria_sicca_BgEED21 | ||
| Strain or Isolate | Neisseria_sicca_BgEED21 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria sicca_C |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 37 | ||
| Contigs |
|
||
| Total Sequence Length | 2,494,758 (bp) | ||
| GC Percentage | 51.14 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/901/873/385/GCA_901873385.1_Neisseria_sicca_BgEED21 | ||
| CDS | 2266 | ||
| Genes | 2418 | ||
| mRNA | 2418 | ||
| misc RNA | 93 | ||
| rRNA | 3 | ||
| tRNA | 55 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.49 % | ||
| CheckM Completeness | 99.57 % | ||
| CheckM Contamination | 0.2 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Neisseria_sicca_BgEED21 |
| GenBank Assembly Accession | GCA_901873385.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_901873385.1 [NCBI] |
| BioSample | SAMEA5664365 [NCBI] |
| BioProject | PRJEB32184 [NCBI] |
| Submitter | WASHINGTON UNIVERSITY CENTER FOR GENOME SCIENCES |
| Submission Date | 2021-02-06T10:37:29.406 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | CABFLG01 |
| NCBI TaxID | 490 |
| Isolation Source | |
| Geo Location | |
