Genome Meta Information: Prevotella melaninogenica Prevotella_melaninogenica_BgEED24 (GCA_901875335.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_901875335.1 | ||
| HOMD Taxon-ID | HMT-0469 | ||
| Species Name (in use by HOMD) | Prevotella melaninogenica | ||
| Organism Name (as deposited) | HMT-469 Prevotella melaninogenica Prevotella_melaninogenica_BgEED24 | ||
| Strain or Isolate | Prevotella_melaninogenica_BgEED24 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella melaninogenica |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 21 | ||
| Contigs |
|
||
| Total Sequence Length | 3,192,247 (bp) | ||
| GC Percentage | 40.52 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/901/875/335/GCA_901875335.1_Prevotella_melaninogenica_BgEED24 | ||
| CDS | 2540 | ||
| Genes | 2601 | ||
| mRNA | 2601 | ||
| misc RNA | 10 | ||
| rRNA | 3 | ||
| tRNA | 47 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.1 % | ||
| CheckM Completeness | 91.19 % | ||
| CheckM Contamination | 4.25 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Prevotella_melaninogenica_BgEE |
| GenBank Assembly Accession | GCA_901875335.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_901875335.1 [NCBI] |
| BioSample | SAMEA5664368 [NCBI] |
| BioProject | PRJEB32184 [NCBI] |
| Submitter | WASHINGTON UNIVERSITY CENTER FOR GENOME SCIENCES |
| Submission Date | 2021-02-06T10:37:47.463 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | CABFMA01 |
| NCBI TaxID | 28132 |
| Isolation Source | |
| Geo Location | |
