Genome Meta Information: Rothia mucilaginosa SRR1952379_bin.15_CONCOCT_v1.1_MAG (GCA_937890405.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_937890405.1 | ||
| HOMD Taxon-ID | HMT-0681 | ||
| Species Name (in use by HOMD) | Rothia mucilaginosa | ||
| Organism Name (as deposited) | HMT-681 Rothia mucilaginosa clade-681 SRR1952379_bin.15_CONCOCT_v1.1_MAG | ||
| Strain or Isolate | SRR1952379_bin.15_CONCOCT_v1.1_MAG | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Micrococcaceae;g__Rothia; s__Rothia sp001836735 |
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| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
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| Total Sequence Length | 2,379,345 (bp) | ||
| GC Percentage | 59.47 | ||
| MAG | yes | ||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/937/890/405/GCA_937890405.1_SRR1952379_bin.15_CONCOCT_v1.1_MAG | ||
| CDS | 1868 | ||
| Genes | 1930 | ||
| mRNA | 1930 | ||
| misc RNA | 12 | ||
| rRNA | 4 | ||
| tRNA | 45 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 0 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
2) OpenAnvi`o (Interactive) OpenSVG (Preview) |
||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | |
| GenBank Assembly Accession | GCA_937890405.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | [NCBI] |
| BioSample | [NCBI] |
| BioProject | [NCBI] |
| Submitter | |
| Submission Date | |
| Assembly Method | |
| Assembly Level | |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | |
| Isolation Source | |
| Geo Location | |
