Taxon Table | Genome Table
Genome Meta Information:
Leptotrichia
sp. HMT-218
SRR1952591_bin.11_CONCOCT_v1.1_MAG (GCA_937900375.1)
| HOMD Genome-ID |
GCA_937900375.1
|
| HOMD Taxon-ID |
HMT-0218
|
| Species Name (in use by HOMD) |
Leptotrichia sp. HMT-218
|
| Organism Name (as deposited) |
HMT-218 Leptotrichia sp. HMT-218 SRR1952591_bin.11_CONCOCT_v1.1_MAG
|
| Strain or Isolate |
SRR1952591_bin.11_CONCOCT_v1.1_MAG
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Leptotrichiaceae;g__Leptotrichia;
s__Leptotrichia sp018128225 |
| Sequencing Technology |
|
| Genome Coverage |
|
| Contigs |
Number of Contigs: 218
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
1,277,788 (bp) |
| GC Percentage |
28.63
|
| MAG |
yes
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/937/900/375/GCA_937900375.1_SRR1952591_bin.11_CONCOCT_v1.1_MAG
|
| CDS |
1145
|
| Genes |
1163
|
| mRNA |
1163
|
| misc RNA |
12
|
| rRNA |
0
|
| tRNA |
5
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
%
|
| CheckM Completeness |
0 %
|
| CheckM Contamination |
0 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
| CRISPR-cas |
No Available
Data |
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
|
| GenBank Assembly Accession |
GCA_937900375.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
[NCBI]
|
| BioSample |
[NCBI]
|
| BioProject |
[NCBI]
|
| Submitter |
|
| Submission Date |
|
| Assembly Method |
|
| Assembly Level |
|
| Sequencing Status |
|
| WGS
Project |
|
| NCBI TaxID |
|
| Isolation Source |
|
| Geo Location |
|
