Taxon Table | Genome Table
Genome Meta Information:
Pseudoleptotrichia
sp. HMT-212
ERR589371_bin.123_CONCOCT_v1.1_MAG (GCA_938011375.1)
| HOMD Genome-ID |
GCA_938011375.1
|
| HOMD Taxon-ID |
HMT-0212
|
| Species Name (in use by HOMD) |
Pseudoleptotrichia sp. HMT-212
|
| Organism Name (as deposited) |
HMT-212 Pseudoleptotrichia sp. HMT-212 ERR589371_bin.123_CONCOCT_v1.1_MAG
|
| Strain or Isolate |
ERR589371_bin.123_CONCOCT_v1.1_MAG
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Leptotrichiaceae;g__Leptotrichia_A;
s__Leptotrichia_A sp001274535 |
| Sequencing Technology |
|
| Genome Coverage |
|
| Contigs |
Number of Contigs: 121
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
2,345,923 (bp) |
| GC Percentage |
31.33
|
| MAG |
yes
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/938/011/375/GCA_938011375.1_ERR589371_bin.123_CONCOCT_v1.1_MAG
|
| CDS |
2220
|
| Genes |
2255
|
| mRNA |
2255
|
| misc RNA |
15
|
| rRNA |
1
|
| tRNA |
18
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
%
|
| CheckM Completeness |
0 %
|
| CheckM Contamination |
0 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
| CRISPR-cas |
3 Contigs
[View]
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
|
| GenBank Assembly Accession |
GCA_938011375.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
[NCBI]
|
| BioSample |
[NCBI]
|
| BioProject |
[NCBI]
|
| Submitter |
|
| Submission Date |
|
| Assembly Method |
|
| Assembly Level |
|
| Sequencing Status |
|
| WGS
Project |
|
| NCBI TaxID |
|
| Isolation Source |
|
| Geo Location |
|
