HOMD ::Order:Absconditabacterales

Order: Absconditabacterales

Full Lineage: Bacteria; Patescibacteria; Patescibacteria [C1]; Absconditabacterales
Lower rank member(s): [Family:Absconditicoccaceae]
Genera:

LINKS: Ecology Home | Life Page: Absconditabacterales

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping ND:Erenv1v3 ND:Erenv3v5 HMP V1-V3 HMP V3-V5 ND:Metaphlan Dewhirst 35x9

No Available Datasets for Order: Absconditabacterales

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.39	0.31	0.13	0.26	0.08	0.01	0.99	0.79	0.60	0.29	0.01	0	0	0.04	0	0.01	0	0
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0	0	0	0	0	0.01	0.07	0.02	0	0	0	0	0	0.04	0	0	0	0
90^thp	1.12	0.82	0.33	0.08	0.21	0.01	2.10	2.08	1.59	0.85	0.02	0	0	0.04	0	0.02	0	0
Stdev	0.62	0.55	0.30	0.94	0.24	0	0.93	1.76	1.17	0.71	0.01	0	0	0	0	0.02	0.03	0
Prev(%)	58.33	59.49	25.00	13.33	13.62	0	62.50	71.43	40.91	42.32	1.54	0	0	0	0	12.50	0	0

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.15	0.13	0	0.04	0.16	1.26	0.28	0.39	0.27	0	0	0	0	0.03	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.46	0.40	0	0.11	0.57	3.52	0.76	0.80	0.45	0	0	0	0	0.02	0	0	0	0
Stdev	0.29	0.31	0	0.09	0.48	2.73	0.71	1.10	1.31	0.03	0	0	0	0.15	0	0	0	0
Prev(%)	58.94	52.98	0	43.15	44.97	68.46	50.59	57.33	41.94	3.33	0	0	0	11.52	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0	0	0	0.06	0	0	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0	0.11	0	0	0	0	0	0	0	0	0	0	0	0
Stdev	0	0	0	0	0	0.24	0	0	0	0	0	0	0	0	0	0	0	0
Prev(%)	0	0	0	0	0	31.25	0	0	0	0	0	0	0	0	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.21	0.06	0.07	0.03	0.05	0.33	0.36	0.60	0.11	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.13	0.12	0.30	0.10	0.14	0.71	1.10	2.62	0.13	0
Stdev	1.41	0.16	0.16	0.05	0.11	1.05	0.84	1.40	0.38	0
Prev(%)	41.89	55.88	58.14	54.29	53.57	64.00	63.64	64.52	55.00	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

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