HOMD ::Species:Absconditicoccaceae [G1] bacterium HMT-875

Species: Absconditicoccaceae [G1] bacterium HMT-875 (HMT-0875) Primary Body Site: Oral

Full Lineage: Bacteria; Patescibacteria; Patescibacteria [C1]; Absconditabacterales; Absconditicoccaceae; Absconditicoccaceae [G1]; Absconditicoccaceae [G1] bacterium HMT-875

LINKS: Ecology Home | HMT-0875: [Body Sites Data] [Taxon Description] | Life Page: Absconditicoccaceae [G1] bacterium HMT-875

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping ND:Erenv1v3 ND:Erenv3v5 HMP V1-V3 HMP V3-V5 ND:Metaphlan Dewhirst 35x9

No Available Datasets for Species: Absconditicoccaceae [G1] bacterium HMT-875

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0.02	0	0.23	0.03	0	0.41	0.16	0.41	0.22	0	0	0	0.03	0	0	0	0
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0.03	0	0	0	0
90^thp	0.01	0.03	0	0.01	0.07	0	1.17	0.45	0.44	0.64	0.01	0	0	0.03	0	0	0	0
Stdev	0	0.08	0.01	0.88	0.07	0	0.63	0.36	1.11	0.60	0.01	0	0	0	0	0	0	0
Prev(%)	0	8.86	0	6.67	8.36	0	37.50	42.86	31.82	36.88	1.54	0	0	0	0	0	0	0

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.02	0.02	0	0.02	0.13	0.75	0.15	0.16	0.17	0	0	0	0	0.02	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.02	0.01	0	0.06	0.39	2.21	0.49	0.46	0.31	0	0	0	0	0	0	0	0	0
Stdev	0.08	0.13	0	0.05	0.46	2.02	0.40	0.53	0.75	0.03	0	0	0	0.10	0	0	0	0
Prev(%)	16.56	13.91	0	28.77	34.23	42.31	38.39	37.33	30.97	3.33	0	0	0	7.83	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0	0	0	0.06	0	0	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0	0.11	0	0	0	0	0	0	0	0	0	0	0	0
Stdev	0	0	0	0	0	0.24	0	0	0	0	0	0	0	0	0	0	0	0
Prev(%)	0	0	0	0	0	31.25	0	0	0	0	0	0	0	0	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0	0.01	0.01	0.01	0.04	0.26	0.18	0.30	0.08	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0	0.01	0.06	0.03	0.08	0.45	0.34	0.36	0.11	0
Stdev	0.01	0.03	0.03	0.04	0.10	0.99	0.59	1.15	0.36	0
Prev(%)	14.87	17.65	41.86	42.86	39.29	56.00	51.52	51.61	45.00	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

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