HOMD ::Species:Actinomyces massiliensis

Species: Actinomyces massiliensis (HMT-0852) Primary Body Site: Oral

Full Lineage: Bacteria; Actinomycetota; Actinomycetes; Actinomycetales; Actinomycetaceae; Actinomyces; Actinomyces massiliensis

LINKS: Ecology Home | HMT-0852: [Body Sites Data] [Taxon Description] | Life Page: Actinomyces massiliensis

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Species: Actinomyces massiliensis

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.98	1.41	0.38	0.20	0.05	0	0.02	0	0	0	0.02	0.01	0.04	0.19	0	0.18	0.01	0
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0.12	0.13	0.02	0	0	0	0	0	0	0	0	0	0	0.19	0	0	0	0
90^thp	1.94	3.53	1.11	0.54	0.11	0	0.05	0	0.01	0.01	0.04	0.03	0.01	0.19	0	0.47	0.01	0
Stdev	1.00	1.52	0.63	0.53	0.11	0	0.04	0	0.01	0.01	0.03	0.01	0.22	0	0	0.49	0.07	0
Prev(%)	83.33	94.94	33.33	33.33	7.74	0	0	0	0	0.95	0	0	3.33	0	0	12.50	1.06	0

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.45	0.54	0.02	0.01	0.01	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	1.23	1.47	0.04	0.03	0.02	0	0	0	0	0
Stdev	0.56	0.74	0.12	0.02	0.01	0.02	0.02	0.01	0	0
Prev(%)	77.92	80.52	20.78	18.18	14.29	9.09	2.60	5.20	1.30	0

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.12	0.13	0	0.01	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.30	0.31	0	0.02	0	0	0	0	0	0
Stdev	0.26	0.22	0.02	0.02	0.01	0.01	0.01	0	0	0
Prev(%)	62.84	66.89	4.05	12.16	6.76	4.05	2.70	2.03	0.68	0

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.54	0.66	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	1.53	1.69	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Stdev	0.70	0.82	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Prev(%)	84.77	89.40	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.59	0.75	0.09	0.04	0	0	0	0	0	0.01	0.02	0.03	0.06	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.02	0.03	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	1.56	1.90	0.16	0.13	0	0	0	0	0	0.04	0	0	0.14	0	0	0	0	0
Stdev	0.78	0.90	0.45	0.10	0	0	0	0	0	0.08	0.18	0.18	0.21	0	0	0	0	0
Prev(%)	92.59	93.90	27.65	36.48	0	0	0	0	0	13.79	9.55	8.64	21.38	0	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.18	0.19	0.01	0	0.01	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0.01	0	0	0	0	0	0	0	0
90^thp	0.46	0.45	0.01	0.01	0.02	0	0	0	0	0
Stdev	0.36	0.39	0.03	0.01	0.02	0	0.01	0	0	0
Prev(%)	77.03	91.18	44.19	45.71	46.43	22.00	21.21	6.45	5.00	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	1.12	1.68	0.33	0.33	0.05	0	0.01	0	0	0	0.02	0	0.04	0	0	0.12	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.10	0.12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	2.21	4.22	1.17	0.61	0.12	0	0.04	0	0	0	0	0	0	0	0	0.01	0	0
Stdev	1.20	1.89	0.71	0.88	0.17	0	0.04	0	0	0.01	0.18	0.01	0.23	0	0	0.44	0.05	0
Prev(%)	91.67	95.96	79.17	47.06	22.87	0	12.50	0	4.00	2.35	3.60	4.17	3.13	0	0	14.29	1.51	0

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