HOMD Banner
Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

Species: Actinomyces sp. HMT-897 (HMT-0897) Primary Body Site: Oral

Download Options
Hide Legend
Oral:
SUBP-- Subgingival Plaque
SUPP -- Supragingival Plaque
PERIO -- Periodontal
AKE -- Attached Keratinized Gingiva
BMU -- Buccal Mucosa
HPA -- Hard Palate
SAL -- Saliva
THR -- Throat
PTO -- Palatine Tonsils
TDO -- Tongue Dorsum
Nasal:
ANA -- Anterior Nares
Skin:
LRC -- L_Retroauricular Crease
RRC -- R_Retroauricular Crease
LAF -- L_Antecubital Fossa
RAF -- R_Antecubital Fossa
Vaginal:
VIN -- Vaginal Introitus
MVA -- Mid Vagina
PFO -- Posterior Fornix
Gut:
STO -- Stool

Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Available Datasets:
 HMP Mapping  ND:Erenv1v3  ND:Erenv3v5  HMP V1-V3  HMP V3-V5  ND:Metaphlan  Dewhirst 35x9
No Available Datasets for Species: Actinomyces sp. HMT-897
Human Microbiome Project Mapping (Data from healthy subjects. - not published)
No Notes

SUBPSUPPPERIOAKEBMUHPASALTHRPTOTDOANALRCRRCRAFVINMVAPFOSTO
Avg (%)0.180.180.8200.0100.010.01000000.020000
n2439524153231872242365233014894375
10thp000.0100000000000.020000
90thp0.070.482.5100.0100.020.010.0100000.0200.0100
Stdev0.750.560.9500.0300.010.010000000000
Prev(%)16.6731.6570.8300.9300000.2400000000
Eren V1-V3 www.pnas.org (Data from healthy subjects.)
No Notes

Eren V3-V5 www.pnas.org (Data from healthy subjects.)
No Notes

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOANALRCRRCLAFRAFVINMVAPFOSTO
Avg (%)00.02000000.030000000000
nNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaN
10thp000000000000000000
90thp00.020000000000000000
Stdev00.10000000.390000000000
Prev(%)017.22000001.330000000000
Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOANALRCRRCLAFRAFVINMVAPFOSTO
Avg (%)0.0300000000000000000
nNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaN
10thp000000000000000000
90thp0.0900000000000000000
Stdev0.0800000000000000000
Prev(%)26.1700000000000000000
Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOANA
Avg (%)0.010.0100000000
nNaNNaNNaNNaNNaNNaNNaNNaNNaNNaN
10thp0000000000
90thp0.040.0200000000
Stdev0.040.0100000000
Prev(%)27.0344.129.305.713.57009.6800
Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)
No Notes