HOMD ::Species:Alloprevotella rava

Species: Alloprevotella rava (HMT-0302) Primary Body Site: Oral

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Full Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae; Alloprevotella; Alloprevotella rava

LINKS: Ecology Home | HMT-0302: [Body Sites Data] [Taxon Description] | Life Page: Alloprevotella rava

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Species: Alloprevotella rava

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.06	0.01	0.09	0.01	0.01	0	0.20	0.04	0.23	0.09	0.01	0	0	0.01	0	0	0	0.01
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0.01	0	0	0	0	0	0.05	0.01	0.01	0	0	0	0	0.01	0	0	0	0
90^thp	0.17	0.02	0.15	0.02	0.03	0	0.43	0.07	0.38	0.25	0	0	0	0.01	0	0	0.01	0.01
Stdev	0.10	0.02	0.15	0.01	0.05	0	0.27	0.03	0.66	0.19	0.04	0	0	0	0	0	0.01	0.15
Prev(%)	16.67	4.81	12.50	0	1.24	0	25.00	28.57	22.73	37.83	3.08	0	0	0	0	0	0	0.27

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0	0	0	0	0.02	0.07	0.12	0.08	0.03	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0.01	0.04	0.06	0.19	0.19	0.07	0
Stdev	0.01	0	0	0.01	0.12	0.34	0.47	0.27	0.12	0
Prev(%)	5.20	0	0	11.69	16.88	27.27	32.47	27.27	16.88	0

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.07	0.03	0	0.04	0.12	0.42	0.52	0.37	0.18	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.22	0.05	0	0.11	0.24	0.88	1.68	0.96	0.40	0
Stdev	0.18	0.11	0.01	0.08	0.35	1.31	1.24	1.06	0.57	0
Prev(%)	35.81	21.62	6.08	39.19	42.57	70.95	60.13	64.19	42.57	0

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0	0.02	0.06	0.24	0.49	0.26	0.10	0	0	0	0.01	0	0	0	0	0.02
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0.03	0.18	0.55	1.43	0.81	0.36	0	0	0	0	0	0	0	0	0
Stdev	0	0	0	0.12	0.17	0.52	1.13	0.59	0.25	0	0	0	0.10	0	0	0	0	0.27
Prev(%)	0	0	0	26.03	44.97	60.77	57.14	62.67	49.03	0	0	0	3.45	0	0	0	0	0.65

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0	0	0	0.50	0.69	0.55	0.31	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0	1.48	2.07	1.70	0.80	0	0	0	0	0	0	0	0	0
Stdev	0	0	0	0	0	1.24	1.47	1.25	0.77	0	0	0	0	0	0	0	0	0
Prev(%)	0	0	0	0	0	69.05	56.70	63.75	54.02	0	0	0	0	0	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.01	0	0	0.01	0.04	0.08	0.17	0.17	0.07	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.01	0.01	0.01	0.04	0.10	0.17	0.35	0.66	0.08	0
Stdev	0.02	0	0.01	0.02	0.07	0.27	0.34	0.31	0.26	0
Prev(%)	36.49	17.65	25.58	60.00	60.71	42.00	69.70	58.06	50.00	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.01	0	0.03	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0.01	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Stdev	0.03	0.01	0.10	0	0	0	0	0	0.01	0	0	0	0	0	0	0	0	0
Prev(%)	8.33	1.01	12.50	0	0.27	0	12.50	0	4.00	0.23	0	0	0	0	0	0	0	0

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