HOMD ::Family:Bacteroidaceae

Family: Bacteroidaceae

Full Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae
Lower rank member(s): [Genus:Bacteroides] [Genus:Phocaeicola]

LINKS: Ecology Home | Life Page: Bacteroidaceae

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping ND:Erenv1v3 ND:Erenv3v5 HMP V1-V3 ND:HMPv3v5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Family: Bacteroidaceae

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.07	0.08	0.26	0.09	0.14	0.01	0.08	0.04	0.12	0.21	3.94	0.09	0.09	1.90	0.07	0.65	1.41	62.04
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0.01	0	0.02	0	0	0.01	0.03	0.03	0.01	0.01	0.01	0	0	1.90	0.04	0	0	32.86
90^thp	0.23	0.07	0.67	0.04	0.19	0.01	0.13	0.06	0.28	0.06	5.34	0.20	0.16	1.90	0.11	1.58	0.64	86.45
Stdev	0.09	0.68	0.32	0.28	0.62	0	0.07	0.02	0.19	3.71	13.70	0.21	0.22	0	0.04	1.77	7.29	20.85
Prev(%)	0	4.05	29.17	0	2.48	0	0	0	9.09	3.07	13.85	4.35	6.67	0	0	12.50	4.26	99.73

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0	0	0	0	0.01	0.03	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Stdev	0	0	0	0	0	0	0.14	0.27	0	0	0	0	0	0	0	0	0	0
Prev(%)	0	0	0	0	0	0	0.59	1.33	0	0	0	0	0	0	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.01	0	0	0	0	0	0	0.01	0	0
Stdev	0.02	0.01	0	0.01	0	0	0.01	0	0	0
Prev(%)	16.22	8.82	4.65	14.29	14.29	10.00	9.09	16.13	5.00	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.02	0.05	0.13	0.72	0.13	0	0	0.11	0.18	0.13	1.55	0.04	0.06	0.71	0.01	0.30	0.84	45.27
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0.71	0	0	0	13.55
90^thp	0.09	0	0.43	0.34	0.10	0	0.01	0.01	0.19	0	3.05	0.21	0.18	0.71	0.03	0.05	0.27	79.69
Stdev	0.05	0.68	0.26	2.75	0.81	0	0.01	0.44	0.67	2.54	6.57	0.10	0.19	0	0.04	1.12	5.09	24.08
Prev(%)	16.67	9.60	45.83	11.77	20.48	0	25.00	12.50	20.00	6.81	27.03	16.67	25.00	100.00	18.18	14.29	26.26	99.45

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