HOMD ::Genus:Bacteroides

Genus: Bacteroides

Full Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
Lower rank member(s): show[+]

[Species:Bacteroides caccae] [Species:Bacteroides heparinolyticus] [Species:Bacteroides ovatus] [Species:Bacteroides pyogenes] [Species:Bacteroides stercoris]
[Species:Bacteroides thetaiotaomicron] [Species:Bacteroides uniformis] [Species:Bacteroides xylanisolvens] [Species:Bacteroides zoogleoformans]

LINKS: Ecology Home | Life Page: Bacteroides

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping ND:Erenv1v3 ND:Erenv3v5 HMP V1-V3 ND:HMPv3v5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Genus: Bacteroides

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.04	0.05	0.12	0.04	0.08	0.01	0.05	0.03	0.08	0.08	2.32	0.05	0.05	1.28	0.03	0.25	0.53	33.64
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0.01	0	0.01	0	0	0.01	0.03	0.01	0.01	0.01	0	0	0	1.28	0.02	0	0	13.36
90^thp	0.10	0.05	0.26	0.03	0.10	0.01	0.07	0.04	0.19	0.04	2.68	0.13	0.09	1.28	0.04	0.62	0.39	55.96
Stdev	0.04	0.40	0.15	0.12	0.37	0	0.03	0.01	0.11	1.19	9.98	0.10	0.12	0	0.02	0.69	2.43	17.05
Prev(%)	0	1.27	8.33	0	2.17	0	0	0	4.55	2.13	12.31	4.35	6.67	0	0	12.50	3.19	98.93

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0	0	0	0	0.01	0.03	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Stdev	0	0	0	0	0	0	0.14	0.27	0	0	0	0	0	0	0	0	0	0
Prev(%)	0	0	0	0	0	0	0.59	1.33	0	0	0	0	0	0	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0	0	0	0	0	0
Stdev	0	0	0	0	0	0	0	0	0	0
Prev(%)	2.70	0	0	0	0	2.00	0	0	0	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.01	0.03	0.02	0.20	0.07	0	0	0.05	0.13	0.05	0.78	0.01	0.03	0.50	0	0.10	0.33	25.39
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0.50	0	0	0	5.06
90^thp	0	0	0.02	0.11	0.02	0	0	0	0.06	0	0.75	0	0.02	0.50	0	0.02	0.05	49.59
Stdev	0.02	0.34	0.07	0.78	0.51	0	0	0.20	0.54	0.81	4.21	0.02	0.11	0	0	0.36	1.99	17.11
Prev(%)	8.33	5.56	12.50	11.77	11.44	0	0	6.25	16.00	3.99	20.27	8.33	18.75	100.00	0	14.29	16.16	99.45

[Species:Bacteroides caccae]	[Species:Bacteroides heparinolyticus]	[Species:Bacteroides ovatus]	[Species:Bacteroides pyogenes]	[Species:Bacteroides stercoris]
[Species:Bacteroides thetaiotaomicron]	[Species:Bacteroides uniformis]	[Species:Bacteroides xylanisolvens]	[Species:Bacteroides zoogleoformans]

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