HOMD ::Phylum:Bacteroidota

Phylum: Bacteroidota

Full Lineage: Bacteria; Bacteroidota
Lower rank member(s): [Class:Bacteroidia] [Class:Chitinophagia] [Class:Flavobacteriia] [Class:Sphingobacteriia]
Genera:

LINKS: Ecology Home | Life Page: Bacteroidota

Hide Legend

Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

Show Legend

Available Datasets:
HMP Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Phylum: Bacteroidota

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	17.43	12.42	21.71	9.01	4.50	7.84	21.40	21.98	23.97	14.17	12.23	0.38	0.24	4.75	2.36	2.84	6.37	85.55
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	6.83	2.81	6.28	0.85	0.79	7.84	13.63	16.63	12.88	6.04	0.14	0.06	0.03	4.75	0.12	0.03	0.03	65.69
90^thp	28.21	23.49	34.31	20.45	9.91	7.84	28.96	29.76	37.30	22.77	38.80	0.86	0.58	4.75	6.33	10.61	18.25	98.13
Stdev	8.22	7.74	10.40	9.08	4.07	0	7.71	6.27	10.21	7.27	21.19	0.61	0.36	0	4.38	5.09	13.71	15.92
Prev(%)	100.00	99.75	100.00	86.67	91.33	100.00	100.00	100.00	100.00	100.00	21.54	13.04	20.00	0	25.00	25.00	24.47	100.00

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	19.21	15.68	10.07	7.37	10.72	17.62	15.08	16.66	14.30	0.01
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	3.99	3.70	0.74	1.34	3.96	9.78	7.01	7.03	5.68	0
90^thp	31.28	26.85	25.21	16.84	18.50	25.48	23.54	27.68	25.05	0.05
Stdev	10.39	8.76	11.03	5.57	5.99	6.59	7.10	8.35	7.55	0.02
Prev(%)	100.00	100.00	100.00	100.00	100.00	100.00	100.00	100.00	100.00	31.17

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	25.12	18.67	13.54	9.25	14.49	26.43	21.73	22.02	18.75	0.01
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	10.24	6.33	0.37	1.88	5.20	14.77	9.44	8.96	7.91	0
90^thp	37.41	28.96	33.51	19.94	25.74	37.78	35.52	36.65	29.30	0.02
Stdev	10.87	8.35	13.63	7.54	8.02	9.32	10.33	11.09	8.45	0.01
Prev(%)	100.00	100.00	99.32	100.00	100.00	100.00	100.00	100.00	100.00	15.38

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	19.14	15.41	11.37	6.34	11.77	19.00	19.17	19.77	14.47	0.50	0.38	0.19	0.88	1.09	0.85	0.78	0.59	0.02
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	6.18	4.74	1.05	0.88	3.69	9.51	8.02	8.70	6.30	0	0	0	0	0	0	0	0	0
90^thp	29.83	26.82	28.59	13.05	19.47	31.55	29.88	30.99	22.69	1.22	0.59	0.32	2.07	3.06	1.14	0.70	0.16	0
Stdev	9.37	9.05	10.95	5.31	6.19	8.29	8.45	8.46	6.21	1.22	1.53	1.03	1.84	2.38	3.17	3.85	3.46	0.27
Prev(%)	100.00	100.00	100.00	99.31	100.00	99.23	99.70	100.00	100.00	78.67	66.09	56.09	72.41	71.89	59.16	44.59	34.21	0.65

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	21.41	16.33	20.81	12.12	13.15	21.45	16.48	21.09	12.15	0.26	1.07	0.71	2.39	1.66	1.04	0.38	0.59	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	7.90	5.02	1.59	2.31	4.42	10.68	6.16	8.79	3.82	0	0	0	0	0	0	0	0	0
90^thp	33.45	27.02	48.95	24.94	23.60	34.11	29.02	34.35	22.83	0.45	1.52	0.85	4.30	4.26	1.63	0.32	0.18	0
Stdev	9.86	8.13	18.23	9.74	7.72	9.07	9.11	10.29	7.79	0.90	3.78	2.66	6.72	4.00	3.46	2.30	3.92	0
Prev(%)	100.00	100.00	100.00	100.00	99.74	100.00	100.00	100.00	100.00	54.02	57.64	52.16	73.79	70.67	64.37	35.52	25.65	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	16.77	14.20	5.96	6.28	13.65	19.56	20.71	21.53	16.64	0.06
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	2.37	3.90	0.15	0.18	2.04	2.58	9.35	7.93	0.47	0
90^thp	30.04	26.66	14.30	17.62	27.00	43.99	30.93	38.27	30.84	0.17
Stdev	10.44	9.05	7.24	6.49	11.19	16.10	9.14	12.04	11.02	0.11
Prev(%)	100.00	100.00	100.00	100.00	100.00	100.00	100.00	100.00	100.00	40.00

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	16.36	12.69	20.41	5.16	5.56	12.01	24.45	23.30	29.02	16.16	2.79	0.09	0.12	5.83	1.06	1.72	2.74	62.41
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	6.86	2.92	6.69	0.26	0.51	12.01	15.16	9.65	16.77	7.42	0	0	0	5.83	0	0	0	29.83
90^thp	24.66	24.41	33.09	7.00	14.08	12.01	35.86	33.78	46.74	25.45	6.06	0.38	0.38	5.83	2.11	8.26	6.68	88.78
Stdev	6.97	7.82	10.05	9.42	5.68	0	9.37	11.05	12.45	7.21	9.67	0.18	0.28	0	2.70	4.28	9.46	21.97
Prev(%)	100.00	99.75	100.00	94.12	99.20	100.00	100.00	100.00	100.00	100.00	45.49	50.00	46.88	100.00	63.64	35.71	46.47	100.00

Copyright 2007-2025, The Forsyth Institute
Hosted on Amazon AWS EC2

Body Site Legend: