HOMD ::Genus:Bifidobacterium

Genus: Bifidobacterium

Full Lineage: Bacteria; Actinomycetota; Actinomycetes; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium
Lower rank member(s): [Species:Bifidobacterium animalis] [Species:Bifidobacterium breve] [Species:Bifidobacterium dentium] [Species:Bifidobacterium longum] [Species:Bifidobacterium scardovii] [Species:Bifidobacterium subtile]

LINKS: Ecology Home | Life Page: Bifidobacterium

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping ND:Erenv1v3 ND:Erenv3v5 ND:HMPv1v3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Genus: Bifidobacterium

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0.02	0	0	0	0.01	0	0.01	0.01	0.01	0	0	0.01	2.72	1.26	0.54	0.27
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0.01	0	0	0	0.01
90^thp	0	0	0.05	0	0	0	0.02	0	0.06	0.01	0.02	0.01	0	0.01	7.61	3.03	0.01	0.41
Stdev	0	0	0.05	0	0.01	0	0.02	0	0.03	0.02	0.01	0.01	0	0	5.43	3.57	3.83	1.22
Prev(%)	0	0	4.17	0	0.31	0	0	0	9.09	4.49	0	0	0	0	25.00	12.50	3.19	30.13

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.01	0	0	0	0.02	0.01	0.02	0.04	0	0.02	0.02	0.03	0.14	0.12	0.54	0.63	1.07	0.10
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0.04	0	0.03	0.03	0	0.01	0.02	0.01	0.24	0.15	0	0	0	0.16
Stdev	0.06	0	0	0.04	0.14	0.07	0.07	0.28	0	0.09	0.09	0.16	0.56	0.49	6.05	7.21	8.13	0.50
Prev(%)	4.69	0	0	3.97	12.53	7.44	14.64	13.38	0	12.26	13.06	11.42	26.21	22.67	8.05	9.84	5.76	45.01

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0	0	0	0	0	0
Stdev	0	0	0	0	0	0	0	0	0	0
Prev(%)	0	0	0	0	3.57	0	0	0	0	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0.01	0	0	0	0	0	0.01	0.01	0	0	0	0	0.94	0.71	1.23	0.24
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0	0	0	0	0.02	0	0	0	0	0	0	0.05	0	0.53
Stdev	0	0	0.05	0	0.02	0	0	0	0.02	0.03	0.02	0.01	0	0	3.12	2.63	6.32	0.85
Prev(%)	0	0.25	8.33	0	1.86	0	0	0	12.00	7.04	2.25	4.17	0	0	9.09	14.29	5.05	65.09

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