HOMD ::Family:Burkholderiaceae

Family: Burkholderiaceae

Full Lineage: Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae
Lower rank member(s): [Genus:Burkholderia] [Genus:Cupriavidus] [Genus:Lautropia] [Genus:Ralstonia]

LINKS: Ecology Home | Life Page: Burkholderiaceae

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Family: Burkholderiaceae

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	1.54	2.85	1.21	0.09	0.55	0.05	1.28	0.01	0.02	0.04	1.05	0.03	0.03	0.64	0.05	0.09	0.34	0.01
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0.06	0.05	0	0	0.01	0.05	0.11	0	0	0	0	0	0	0.64	0.01	0.02	0	0
90^thp	4.09	7.03	1.84	0.33	1.13	0.05	2.89	0.03	0.05	0.08	4.90	0.12	0.03	0.64	0.09	0.16	1.24	0.01
Stdev	1.65	4.32	3.30	0.17	1.67	0	2.86	0.02	0.03	0.15	2.19	0.05	0.11	0	0.05	0.07	0.88	0.01
Prev(%)	83.33	90.38	45.83	26.67	47.06	100.00	62.50	14.29	0	31.91	3.08	4.35	10.00	0	0	25.00	2.13	0

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	4.08	4.87	0.07	0.84	0.33	1.81	0.33	0.15	0.04	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.03	0.03	0	0	0	0	0	0	0	0
90^thp	12.86	13.48	0.22	1.88	0.88	5.14	0.50	0.56	0.13	0
Stdev	5.88	6.03	0.11	2.03	0.65	3.56	1.32	0.35	0.09	0
Prev(%)	92.21	90.91	59.74	85.71	76.62	83.12	59.74	53.25	42.86	2.60

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	1.91	3.01	0.06	0.60	0.28	1.28	0.18	0.15	0.06	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0.06	0	0	0	0.02	0	0	0	0
90^thp	4.99	6.39	0.12	1.23	0.77	3.24	0.42	0.47	0.13	0
Stdev	2.98	4.55	0.28	1.31	0.54	1.69	0.49	0.36	0.16	0.01
Prev(%)	87.16	93.24	33.78	85.14	76.35	90.54	59.46	58.11	45.95	0.70

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	2.73	3.41	0.30	0.87	0.28	1.85	0.24	0.09	0.02	0.13	0.27	0.43	2.29	1.92	0.06	0.03	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.01	0.03	0	0	0	0.01	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	7.11	8.95	0.30	1.81	0.68	3.64	0.50	0.26	0.07	0.20	0.23	0.32	5.19	2.85	0.03	0.07	0	0
Stdev	3.92	4.94	1.48	1.83	0.50	4.29	0.95	0.19	0.05	0.73	1.36	2.11	6.44	6.49	0.33	0.08	0	0
Prev(%)	90.07	92.05	68.53	84.93	77.18	90.00	61.31	56.00	43.23	48.67	41.38	49.01	72.41	64.06	15.49	14.87	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	3.03	4.25	0.38	1.44	0.49	1.69	0.43	0.19	0.06	0.19	0.33	0.66	3.21	1.83	0.15	0.39	0	0.01
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.04	0.09	0	0	0	0.03	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	7.85	10.16	0.82	3.27	1.44	4.72	0.97	0.46	0.13	0.39	0.46	0.82	3.06	4.10	0.37	0.11	0	0
Stdev	4.51	6.09	1.21	3.21	0.85	2.78	1.32	0.51	0.17	1.04	2.36	3.72	10.99	7.18	0.54	3.07	0.03	0.18
Prev(%)	94.81	95.61	56.79	84.61	75.19	91.67	63.24	61.31	46.23	50.58	51.27	47.84	69.66	66.00	22.41	18.58	6.81	1.22

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.85	1.27	0.08	0.34	0.13	0.06	0.02	0.14	0.08	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0.01	0	0	0	0	0	0	0	0
90^thp	1.74	1.87	0.13	1.08	0.27	0.09	0.03	0.05	0.06	0
Stdev	2.25	3.77	0.28	0.79	0.24	0.14	0.03	0.67	0.34	0
Prev(%)	82.43	88.23	67.44	85.71	85.71	82.00	72.73	67.74	45.00	5.00

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	1.63	3.13	1.29	0.09	0.86	0.06	1.63	0	0	0.04	0.03	0.01	0.02	0.10	0.01	0.04	0.02	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.04	0.04	0	0	0	0.06	0.09	0	0	0	0	0	0	0.10	0	0	0	0
90^thp	4.41	7.75	1.91	0.38	1.98	0.06	3.79	0	0	0.08	0	0.02	0.02	0.10	0.03	0.15	0	0
Stdev	1.93	4.90	4.05	0.20	2.87	0	3.96	0.01	0.01	0.15	0.18	0.03	0.09	0	0.01	0.07	0.11	0
Prev(%)	91.67	92.93	58.33	35.29	70.48	100.00	87.50	6.25	8.00	38.97	6.76	16.67	15.63	100.00	18.18	42.86	8.59	0.18

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