HOMD ::Order:Burkholderiales

Order: Burkholderiales

Full Lineage: Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales
Lower rank member(s): [Family:Alcaligenaceae] [Family:Burkholderiaceae] [Family:Comamonadaceae]
Genera:

LINKS: Ecology Home | Life Page: Burkholderiales

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Order: Burkholderiales

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	1.64	3.06	1.47	0.14	0.58	0.05	1.33	0.02	0.10	0.05	1.23	0.25	0.08	1.77	0.10	0.16	0.39	0.02
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0.16	0.09	0	0	0.01	0.05	0.16	0	0.01	0	0.02	0.02	0.01	1.77	0.03	0.06	0	0
90^thp	4.13	7.58	3.59	0.46	1.24	0.05	2.94	0.04	0.13	0.08	4.97	0.49	0.16	1.77	0.18	0.27	1.27	0.04
Stdev	1.68	4.47	3.35	0.27	1.68	0	2.90	0.02	0.24	0.26	2.27	0.66	0.13	0	0.08	0.10	0.91	0.02
Prev(%)	87.50	92.15	45.83	26.67	48.61	100.00	62.50	14.29	0	32.15	3.08	8.70	13.33	0	0	25.00	2.13	0

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	4.17	4.92	0.07	0.86	0.33	1.81	0.33	0.15	0.04	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.03	0.03	0	0	0	0	0	0	0	0
90^thp	12.97	13.56	0.22	1.88	0.88	5.16	0.50	0.56	0.13	0
Stdev	5.92	6.04	0.11	2.04	0.65	3.56	1.32	0.35	0.09	0
Prev(%)	92.21	90.91	59.74	85.71	77.92	83.12	59.74	53.25	42.86	2.60

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	2.22	3.21	0.06	0.63	0.33	1.29	0.33	0.15	0.06	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0.06	0	0	0	0.03	0	0	0	0
90^thp	6.06	6.83	0.12	1.28	0.84	3.24	0.48	0.47	0.13	0
Stdev	3.56	4.59	0.28	1.35	0.63	1.70	1.31	0.36	0.16	0.01
Prev(%)	88.51	95.27	35.13	85.14	82.43	91.22	65.54	60.13	45.95	1.40

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	3.00	3.60	0.34	0.94	0.32	1.89	0.32	0.09	0.02	3.13	0.41	0.64	3.19	2.55	0.35	0.13	0.01	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.04	0.05	0	0	0	0.04	0	0	0	0	0	0	0.03	0	0	0	0	0
90^thp	8.03	9.02	0.44	1.92	0.75	4.23	0.75	0.27	0.07	10.36	0.57	0.91	6.46	4.70	0.08	0.14	0.01	0
Stdev	4.01	4.99	1.49	1.90	0.62	4.30	0.97	0.20	0.05	7.18	1.59	2.69	6.71	6.84	2.29	0.66	0.05	0
Prev(%)	92.72	93.38	74.83	89.04	80.54	93.08	75.00	60.67	43.23	83.67	68.68	77.05	93.68	85.71	36.62	31.08	11.84	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	3.27	4.46	0.53	1.44	0.61	1.69	0.56	0.20	0.06	0.19	0.58	0.88	3.66	2.54	0.26	0.47	0	0.01
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.06	0.12	0	0	0	0.03	0	0	0	0	0	0	0.01	0	0	0	0	0
90^thp	8.28	10.45	0.96	3.27	1.57	4.72	1.06	0.48	0.13	0.39	0.93	1.08	4.45	5.33	0.45	0.17	0	0
Stdev	4.63	6.10	2.80	3.21	1.48	2.78	1.90	0.57	0.17	1.04	2.69	4.23	11.08	7.61	1.25	3.50	0.03	0.18
Prev(%)	95.80	97.56	58.77	84.61	80.82	91.67	68.54	63.50	46.23	50.58	71.34	58.64	89.66	86.00	31.03	25.68	6.81	1.22

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	1.01	1.43	0.08	0.34	0.14	0.06	0.02	0.16	0.08	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0.01	0	0	0	0	0	0	0	0
90^thp	2.57	2.54	0.13	1.09	0.27	0.10	0.03	0.05	0.06	0
Stdev	2.30	3.75	0.28	0.79	0.24	0.14	0.03	0.80	0.34	0
Prev(%)	85.14	88.23	69.77	85.71	85.71	82.00	75.76	67.74	45.00	5.00

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	1.70	3.37	1.65	0.10	0.89	0.06	1.63	0	0	0.05	0.05	0.01	0.03	0.48	0.01	0.04	0.02	0.02
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.09	0.06	0	0	0	0.06	0.09	0	0	0	0	0	0	0.48	0	0	0	0
90^thp	4.46	8.40	4.80	0.38	2.02	0.06	3.79	0	0.01	0.08	0.01	0.05	0.03	0.48	0.03	0.15	0	0
Stdev	1.95	5.08	4.15	0.20	2.87	0	3.96	0.01	0.01	0.23	0.26	0.04	0.11	0	0.01	0.07	0.11	0.15
Prev(%)	95.83	95.20	58.33	47.06	72.61	100.00	87.50	6.25	12.00	39.44	10.36	25.00	21.88	100.00	18.18	42.86	9.60	2.73

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