HOMD ::Species:Campylobacter sp. HMT-044

Species: Campylobacter sp. HMT-044 (HMT-0044) Primary Body Site: Oral

Full Lineage: Bacteria; Pseudomonadota; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter; Campylobacter sp. HMT-044

LINKS: Ecology Home | HMT-0044: [Body Sites Data] [Taxon Description] | Life Page: Campylobacter sp. HMT-044

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
ND:Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 ND:Metaphlan Dewhirst 35x9

No Available Datasets for Species: Campylobacter sp. HMT-044

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.03	0.01	0.14	0.01	0.11	0.11	0.09	0.06	0.10	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0.18	0.04	0.37	0.33	0.23	0.15	0.15	0
Stdev	0.19	0.03	0.90	0.03	0.25	0.26	0.22	0.17	0.37	0
Prev(%)	9.09	3.90	20.78	19.48	38.96	38.96	37.66	31.17	31.17	0

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0	0	0.01	0.01	0.03	0.05	0.05	0.02	0.02	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0.03	0	0.07	0.12	0.13	0.07	0.06	0
Stdev	0.02	0.01	0.05	0.03	0.09	0.13	0.14	0.09	0.06	0
Prev(%)	2.70	2.70	16.22	8.78	20.27	29.05	27.70	18.92	24.32	0

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.01	0	0.10	0.01	0.14	0.10	0.08	0.07	0.07	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0.13	0.02	0.35	0.28	0.23	0.17	0.15	0	0	0	0	0	0	0	0	0
Stdev	0.10	0	0.73	0.04	0.55	0.23	0.19	0.17	0.25	0	0	0	0	0	0	0	0	0
Prev(%)	6.62	0	20.98	17.12	33.56	35.38	39.29	41.33	36.77	0	0	0	0	0	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0.06	0	0.07	0.10	0.06	0.05	0.03	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0.12	0	0.17	0.27	0.22	0.14	0.08	0	0	0	0	0	0	0	0	0
Stdev	0	0	0.21	0	0.26	0.16	0.12	0.10	0.09	0	0	0	0	0	0	0	0	0
Prev(%)	0	0	19.75	0	31.20	60.12	40.19	47.20	33.58	0	0	0	0	0	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0	0	0.01	0.04	0.23	0.01	0.04	0.08	0.02	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.01	0.01	0.05	0.04	0.10	0.04	0.10	0.14	0.04	0
Stdev	0.02	0.01	0.04	0.13	0.92	0.02	0.11	0.21	0.06	0
Prev(%)	25.68	23.53	25.58	37.14	50.00	44.00	48.48	54.84	42.50	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

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