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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

Species: Capnocytophaga sp. HMT-878 (HMT-0878) Primary Body Site: Oral

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Full Lineage: Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga; Capnocytophaga sp. HMT-878

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Oral:
SUBP-- Subgingival Plaque
SUPP -- Supragingival Plaque
PERIO -- Periodontal
AKE -- Attached Keratinized Gingiva
BMU -- Buccal Mucosa
HPA -- Hard Palate
SAL -- Saliva
THR -- Throat
PTO -- Palatine Tonsils
TDO -- Tongue Dorsum
Nasal:
ANA -- Anterior Nares
Skin:
LRC -- L_Retroauricular Crease
RRC -- R_Retroauricular Crease
LAF -- L_Antecubital Fossa
RAF -- R_Antecubital Fossa
Vaginal:
VIN -- Vaginal Introitus
MVA -- Mid Vagina
PFO -- Posterior Fornix
Gut:
STO -- Stool

Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Available Datasets:
 HMP Mapping  ND:Erenv1v3  ND:Erenv3v5  HMP V1-V3  ND:HMPv3v5  ND:Metaphlan  Dewhirst 35x9
No Available Datasets for Species: Capnocytophaga sp. HMT-878
Human Microbiome Project Mapping (Data from healthy subjects. - not published)
No Notes

SUBPSUPPPERIOAKEBMUHPASALTHRPTOTDOANALRCRRCRAFVINMVAPFOSTO
Avg (%)0.140.150.020.010.0200.030.040.040.010000.0100.0300
n2439524153231872242365233014894375
10thp0.060.0400000.010000000.010000
90thp0.220.290.070.020.0400.050.110.130.040.01000.0100.0700.01
Stdev0.070.110.030.010.0400.020.070.100.03000000.080.010
Prev(%)03.8000000000.2400000000
Eren V1-V3 www.pnas.org (Data from healthy subjects.)
No Notes

Eren V3-V5 www.pnas.org (Data from healthy subjects.)
No Notes

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOANALRCRRCLAFRAFVINMVAPFOSTO
Avg (%)0.010.0100000.010.010000000000
nNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaN
10thp000000000000000000
90thp000000000000000000
Stdev0.060.0300000.090.040000000000
Prev(%)7.958.6100005.365.330000000000
Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)
No Notes

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOANA
Avg (%)0.010.01000.0100000
nNaNNaNNaNNaNNaNNaNNaNNaNNaNNaN
10thp0000000000
90thp0.010.0300000000
Stdev0.030.03000.0300.01000
Prev(%)27.0355.886.988.5710.716.006.066.4500
Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)
No Notes