HOMD ::Order:Cardiobacteriales

Order: Cardiobacteriales

Full Lineage: Bacteria; Pseudomonadota; Gammaproteobacteria; Cardiobacteriales
Lower rank member(s): [Family:Cardiobacteriaceae]
Genera:

LINKS: Ecology Home | Life Page: Cardiobacteriales

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Order: Cardiobacteriales

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	1.35	1.13	0.32	0.03	0.05	0.01	0.08	0.01	0.01	0.01	0.02	0.01	0.04	0.05	0	0.18	0	0
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0.18	0.13	0	0	0	0.01	0.03	0	0	0	0	0	0	0.05	0	0	0	0
90^thp	3.08	2.40	1.00	0.09	0.12	0.01	0.17	0.02	0.01	0.01	0.04	0.03	0.01	0.05	0	0.46	0.01	0
Stdev	1.23	1.01	0.46	0.08	0.11	0	0.08	0.02	0.01	0.05	0.04	0.03	0.19	0	0	0.47	0.01	0
Prev(%)	87.50	93.42	45.83	0	10.53	0	12.50	0	0	4.02	0	0	3.33	0	0	12.50	0	0

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.13	0.17	0.01	0.01	0.01	0.01	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.39	0.48	0	0.02	0.01	0.02	0	0	0	0
Stdev	0.22	0.25	0.07	0.02	0.02	0.02	0.01	0.01	0	0
Prev(%)	70.13	75.33	6.49	16.88	15.58	14.29	3.90	3.90	1.30	0

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.23	0.30	0.01	0.02	0	0.01	0.01	0.01	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.61	0.86	0	0.04	0.01	0.05	0	0	0	0
Stdev	0.44	0.48	0.07	0.06	0.02	0.03	0.03	0.04	0.01	0
Prev(%)	64.19	67.57	4.73	20.27	10.13	20.95	8.11	6.08	7.43	0

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.20	0.21	0.02	0	0	0	0	0	0	0	0.01	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.51	0.56	0.02	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Stdev	0.29	0.28	0.11	0	0	0	0	0	0	0	0.08	0	0	0	0	0	0	0
Prev(%)	82.12	86.75	14.69	0	0	0	0	0	0	0	5.17	0	0	0	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.33	0.42	0.03	0.03	0	0.02	0	0	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.02	0.03	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.80	0.92	0.04	0.08	0	0.06	0	0	0	0	0	0	0	0	0	0	0	0
Stdev	0.43	0.54	0.18	0.09	0	0.08	0	0	0	0	0	0	0	0	0	0	0	0
Prev(%)	91.11	92.44	16.30	27.79	0	36.01	0	0	0	0	0	0	0	0	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.08	0.10	0	0	0.02	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.15	0.29	0.01	0.01	0.03	0.01	0	0	0	0
Stdev	0.20	0.14	0.01	0.01	0.05	0.01	0.02	0.02	0	0
Prev(%)	71.62	88.23	32.56	51.43	46.43	42.00	15.15	12.90	5.00	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	1.51	1.45	0.38	0.05	0.05	0	0.03	0	0	0.01	0	0	0.03	0	0	0.15	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.35	0.14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	3.31	3.11	1.27	0.26	0.10	0	0.09	0	0	0	0	0	0	0	0	0	0	0
Stdev	1.35	1.29	0.55	0.11	0.15	0	0.05	0.01	0	0.07	0.01	0	0.19	0	0	0.56	0	0
Prev(%)	100.00	96.21	70.83	23.53	26.86	0	50.00	6.25	0	9.62	0.90	4.17	3.13	0	0	7.14	0	0.18

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