HOMD ::Species:Corynebacterium durum

Species: Corynebacterium durum (HMT-0595) Primary Body Site: Oral

Full Lineage: Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Corynebacteriaceae; Corynebacterium; Corynebacterium durum

LINKS: Ecology Home | HMT-0595: [Body Sites Data] [Taxon Description] | Life Page: Corynebacterium durum

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Species: Corynebacterium durum

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	1.31	1.61	0.13	0.04	0.05	0.01	0.07	0	0.01	0.01	0.03	0.02	0.13	0.54	0	0.26	0.01	0
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0.16	0.15	0	0	0	0.01	0.02	0	0	0	0	0	0	0.54	0	0	0	0
90^thp	3.49	3.74	0.39	0.09	0.09	0.01	0.13	0.01	0.01	0.02	0.06	0.06	0.02	0.54	0.01	0.63	0.01	0
Stdev	1.51	1.77	0.20	0.09	0.08	0	0.05	0.01	0.01	0.01	0.07	0.03	0.67	0	0.01	0.73	0.04	0.01
Prev(%)	91.67	95.19	33.33	20.00	9.29	0	25.00	14.29	4.55	9.69	0	4.35	6.67	0	0	12.50	1.06	0.27

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	2.02	2.84	0.03	0.09	0.13	0.13	0.13	0.02	0.01	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.03	0.15	0	0	0	0	0	0	0	0
90^thp	4.71	6.58	0.09	0.23	0.35	0.36	0.09	0.06	0.02	0
Stdev	2.57	2.93	0.07	0.14	0.22	0.26	0.85	0.04	0.03	0
Prev(%)	90.91	93.51	37.66	72.73	72.73	59.74	37.66	28.57	22.08	0

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	1.76	2.99	0.02	0.12	0.20	0.12	0.04	0.03	0.02	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.03	0.19	0	0	0	0	0	0	0	0
90^thp	4.25	6.99	0.05	0.23	0.26	0.31	0.09	0.07	0.06	0
Stdev	2.65	3.51	0.07	0.43	1.14	0.21	0.10	0.10	0.04	0.01
Prev(%)	91.22	95.95	25.00	65.54	71.62	70.27	45.27	36.49	37.16	2.80

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	1.14	1.70	0	0.06	0.07	0.10	0.06	0	0	0.03	0.04	0	0	0.08	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0.06	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	3.13	4.45	0	0.15	0.16	0.19	0.06	0	0	0.08	0.05	0	0	0.20	0	0	0	0
Stdev	1.60	2.29	0	0.10	0.15	0.22	0.45	0	0	0.08	0.24	0	0	0.30	0	0	0	0
Prev(%)	88.74	91.39	0	63.01	63.09	60.00	32.14	0	0	24.00	19.54	0	0	22.58	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	1.71	2.92	0.09	0.16	0.17	0.14	0.10	0.03	0	0	0.07	0.09	0.30	0.17	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.03	0.16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	4.56	7.19	0.17	0.40	0.37	0.37	0.12	0.08	0	0	0.06	0.09	0.48	0.30	0	0	0	0
Stdev	2.33	3.67	0.36	0.35	0.43	0.24	0.66	0.10	0	0	0.47	0.60	1.18	0.71	0	0	0	0
Prev(%)	92.35	96.83	34.57	66.50	61.13	69.64	34.89	35.52	0	0	21.02	20.99	38.62	30.00	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.24	0.12	0.01	0.06	0.13	0.02	0.01	0.01	0.01	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0.02	0	0	0	0	0
90^thp	0.73	0.30	0.03	0.10	0.37	0.06	0.02	0.02	0.01	0
Stdev	0.73	0.18	0.03	0.15	0.17	0.03	0.02	0.01	0.03	0.01
Prev(%)	68.92	82.35	48.84	88.57	96.43	88.00	63.64	41.94	30.00	10.00

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	1.58	1.98	0.13	0.04	0.04	0	0.04	0	0	0.01	0.01	0.01	0.12	0.40	0	0.19	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.15	0.17	0	0	0	0	0	0	0	0	0	0	0	0.40	0	0	0	0
90^thp	4.57	4.63	0.42	0.12	0.12	0	0.16	0	0	0.02	0	0.01	0	0.40	0	0	0	0
Stdev	1.89	2.19	0.21	0.12	0.13	0	0.07	0.01	0	0.01	0.04	0.02	0.68	0	0	0.71	0.03	0.01
Prev(%)	95.83	97.22	50.00	23.53	39.36	0	37.50	6.25	4.00	18.31	2.70	12.50	9.38	100.00	0	7.14	0.51	0.18

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