HOMD ::Species:Cutibacterium acnes

Species: Cutibacterium acnes (HMT-0530) Primary Body Site: Skin

Full Lineage: Bacteria; Actinomycetota; Actinomycetes; Propionibacteriales; Propionibacteriaceae; Cutibacterium; Cutibacterium acnes

LINKS: Ecology Home | HMT-0530: [Body Sites Data] [Taxon Description] | Life Page: Cutibacterium acnes

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Species: Cutibacterium acnes

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.01	0.01	0.01	0.03	0.03	0.01	0.04	0.02	0.01	0.01	22.40	64.76	62.56	21.78	0.03	0.01	0.07	0.01
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0	0	0	0	0	0.01	0.01	0	0	0	1.22	20.82	4.28	21.78	0	0	0	0
90^thp	0.01	0.01	0.01	0.02	0.07	0.01	0.07	0.04	0.03	0.03	45.68	88.43	91.96	21.78	0.06	0.03	0.08	0.01
Stdev	0.03	0.02	0.01	0.08	0.07	0	0.03	0.02	0.01	0.02	18.05	26.33	32.96	0	0.03	0.01	0.25	0.03
Prev(%)	0	4.56	0	6.67	3.72	0	0	0	0	1.18	84.62	100.00	100.00	100.00	0	0	7.45	1.07

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.01	0.01	0.01	0.03	0.04	0.20	0.04	0.02	0.01	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.05	0.01	0.03	0.06	0.12	0.31	0.14	0.04	0.02	0
Stdev	0.04	0.04	0.03	0.12	0.06	0.81	0.09	0.07	0.02	0.01
Prev(%)	28.57	12.99	23.38	35.06	42.86	46.75	35.06	25.97	12.99	5.20

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.02	0.02	0.01	0.01	0.04	0.09	0.04	0.01	0.01	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.03	0	0.02	0.04	0.07	0.10	0.12	0.03	0	0
Stdev	0.14	0.18	0.07	0.05	0.12	0.63	0.12	0.03	0.05	0.02
Prev(%)	14.87	10.13	14.87	25.68	40.54	37.16	39.19	20.27	7.43	3.50

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.03	0.03	0.04	0.28	0.17	0.60	0.20	0.03	0.01	22.68	56.87	56.45	41.40	43.42	0	0.05	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	5.78	6.86	6.45	6.15	6.28	0	0	0	0
90^thp	0.05	0.03	0.05	0.17	0.24	0.61	0.28	0.05	0.03	44.52	94.21	94.92	77.88	81.79	0	0.15	0	0
Stdev	0.15	0.11	0.15	1.66	0.63	3.20	0.95	0.15	0.06	15.75	32.05	32.64	26.63	27.66	0	0.09	0	0
Prev(%)	36.42	25.83	34.97	43.84	53.69	60.77	41.07	27.33	23.23	99.00	100.00	100.00	99.42	100.00	0	56.76	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	1.10	0.70	0.95	1.09	1.13	0.98	1.00	0.23	0.96	29.21	68.00	66.46	42.38	45.14	0.51	0.51	0.66	0.60
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	5.97	5.15	8.51	1.27	1.71	0	0	0	0
90^thp	0.04	0.02	0.14	0.20	0.27	0.23	0.49	0.05	0.02	57.04	98.07	98.08	87.57	85.90	0.06	0.07	0.03	0
Stdev	8.76	7.31	7.77	8.86	8.41	7.84	6.75	2.31	8.59	19.99	34.23	34.37	30.87	31.99	6.40	6.42	6.85	6.66
Prev(%)	22.72	17.56	23.21	34.74	47.06	51.49	40.50	22.87	12.65	100.00	99.68	99.69	97.93	99.33	32.18	39.34	23.56	8.52

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.01	0.01	0	0.01	0.01	0	0.01	0.02	0	18.66
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	3.39
90^thp	0.01	0	0.01	0.01	0.01	0.01	0.03	0.01	0	46.65
Stdev	0.06	0.05	0.01	0.01	0.03	0.01	0.03	0.10	0	21.46
Prev(%)	37.84	20.59	27.91	48.57	53.57	30.00	39.39	35.48	10.00	100.00

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0	0.02	0.13	0	0.01	0	0	0.10	24.46	61.51	61.00	31.82	0	0.07	0.04	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	3.21	9.63	1.95	31.82	0	0	0	0
90^thp	0	0	0	0	0.07	0	0.04	0	0	0	50.74	88.94	93.15	31.82	0	0.20	0	0
Stdev	0.01	0.02	0	0.10	1.97	0	0.02	0	0	1.55	18.92	29.00	33.27	0	0	0.21	0.23	0.01
Prev(%)	8.33	7.58	0	5.88	19.15	0	37.50	0	0	3.05	95.50	100.00	100.00	100.00	9.09	14.29	9.60	1.64

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