HOMD ::Family:Enterobacteriaceae

Family: Enterobacteriaceae

Full Lineage: Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae
Lower rank member(s): [Genus:Cronobacter] [Genus:Enterobacter] [Genus:Escherichia] [Genus:Klebsiella] [Genus:Kluyvera]

LINKS: Ecology Home | Life Page: Enterobacteriaceae

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping ND:Erenv1v3 ND:Erenv3v5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Family: Enterobacteriaceae

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.10	0.01	0	0.03	0.01	0	0.02	0.03	0.07	0.01	1.13	0.01	0.01	11.11	0.04	0.04	0.09	0.37
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	11.11	0.01	0.01	0	0
90^thp	0.15	0.01	0	0.08	0.02	0	0.04	0.08	0.19	0	1.80	0.04	0.03	11.11	0.09	0.07	0.07	0.27
Stdev	0.29	0.07	0	0.06	0.03	0	0.02	0.06	0.14	0.04	5.33	0.02	0.03	0	0.04	0.03	0.50	5.05
Prev(%)	25.00	2.78	0	13.33	1.86	0	12.50	28.57	18.18	3.78	16.92	0	0	100.00	0	12.50	5.32	23.73

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0	0	0.03	0.03	0.10	0	0	0.16	0.03	0.03	0.22	0.11	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0	0.02	0	0	0	0.36	0	0	0.19	0.14	0	0	0	0
Stdev	0	0	0	0	0.28	0.27	1.86	0	0	0.59	0.26	0.37	1.57	0.66	0	0	0	0
Prev(%)	0	0	0	0	8.05	13.08	3.27	0	0	35.00	8.91	7.08	36.21	39.17	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.01	0.02	0.04	0	0.08	0	0.37	0	0.01	1.20	0.25	0.35	1.04	1.17	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0.05	0	0.04	0	0	2.47	0.27	0.39	1.80	2.30	0	0	0	0
Stdev	0.10	0.26	0.24	0	0.55	0	4.60	0	0.14	3.69	2.39	3.12	3.87	4.06	0	0	0	0
Prev(%)	4.44	3.90	8.89	0	15.35	0	15.27	0	3.16	58.24	39.49	40.74	61.38	67.33	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0	0	0	0	0	0	0	0.04	0	0.07
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0	0	0	0	0	0.08
Stdev	0	0.01	0	0	0	0	0	0.19	0	0.26
Prev(%)	8.11	8.82	6.98	11.43	10.71	2.00	3.03	6.45	2.50	15.00

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.08	0	0	0.02	0	0	0.01	4.75	0.04	0.04	0.79	0	0	12.49	0.01	0.54	0.16	0.21
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	12.49	0	0	0	0
90^thp	0.12	0	0	0.09	0	0	0.01	8.72	0.09	0	0.15	0	0	12.49	0.02	0.41	0	0.11
Stdev	0.26	0.01	0	0.04	0.02	0	0.02	14.66	0.12	0.74	6.63	0	0	0	0.01	1.80	1.01	4.07
Prev(%)	29.17	2.27	0	23.53	2.93	0	12.50	37.50	28.00	2.58	13.96	0	0	100.00	18.18	42.86	10.10	28.36

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