HOMD ::Class:Erysipelotrichia

Class: Erysipelotrichia

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Full Lineage: Bacteria; Bacillota; Erysipelotrichia
Lower rank member(s): [Order:Erysipelotrichales]
Genera:

LINKS: Ecology Home | Life Page: Erysipelotrichia

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping Eren V1-V3 ND:Erenv3v5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Class: Erysipelotrichia

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.11	0.02	0.38	0.02	0.04	0.12	0.34	0.74	0.55	0.48	0.03	0	0	0.09	0	0	0.01	0.02
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0.02	0	0.03	0.01	0.01	0.12	0.14	0.38	0.10	0.09	0	0	0	0.09	0	0	0	0
90^thp	0.19	0.06	1.28	0.05	0.07	0.12	0.56	1.07	0.85	0.95	0.03	0	0	0.09	0.01	0.01	0.02	0.04
Stdev	0.23	0.05	0.58	0.02	0.05	0	0.20	0.33	0.73	0.46	0.10	0	0.01	0	0.01	0	0.07	0.04
Prev(%)	33.33	15.44	45.83	0	4.95	100.00	62.50	100.00	72.73	95.27	3.08	0	0	0	0	0	1.06	1.07

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.03	0.01	0	0.03	0.20	0.27	0.36	0.36	0.29	0.02
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0.01	0	0	0
90^thp	0.12	0.04	0	0.07	0.43	0.73	0.72	0.99	0.80	0
Stdev	0.07	0.03	0.01	0.06	0.41	0.40	0.51	0.45	0.35	0.14
Prev(%)	33.77	24.68	7.79	45.45	80.52	76.62	89.61	85.71	88.31	2.60

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.05	0.01	0	0.03	0.28	0.28	0.45	0.39	0.36	0.01	0	0	0	0.01	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0.02	0.01	0.02	0	0	0	0	0	0	0	0	0
90^thp	0.11	0.03	0	0.09	0.57	0.67	0.99	0.86	0.86	0	0	0	0	0	0	0	0	0
Stdev	0.14	0.03	0	0.06	0.44	0.37	0.49	0.41	0.37	0.05	0.02	0	0	0.06	0	0	0	0
Prev(%)	47.68	28.48	0	54.80	82.55	77.69	90.77	91.33	94.19	7.67	0.29	0	0	5.99	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0	0	0.02	0	0.03	0	0.03	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0.08	0	0.08	0	0.08	0	0	0	0	0	0	0	0	0
Stdev	0	0	0	0	0.05	0	0.07	0	0.06	0	0	0	0	0	0	0	0	0
Prev(%)	0	0	0	0	34.53	0	39.88	0	47.93	0	0	0	0	0	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.16	0.09	0.32	0.05	0.13	0.59	0.36	0.32	0.53	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0.01	0.03	0.03	0.01	0	0
90^thp	0.43	0.13	0.76	0.12	0.34	1.61	0.71	0.72	1.68	0
Stdev	0.39	0.27	0.90	0.06	0.17	0.79	0.61	0.42	0.81	0.01
Prev(%)	67.57	73.53	67.44	80.00	89.29	98.00	100.00	96.77	95.00	5.00

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.08	0.02	0.34	0.01	0.04	0.24	0.57	0.85	0.56	0.52	0.01	0	0	0	0	0	0	0.01
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0.24	0.11	0	0.03	0.05	0	0	0	0	0	0	0	0
90^thp	0.17	0.04	1.35	0.02	0.12	0.24	0.96	2.05	1.21	1.13	0	0	0	0	0	0	0	0
Stdev	0.21	0.08	0.63	0.02	0.09	0	0.40	0.99	0.81	0.48	0.06	0	0	0	0	0	0.05	0.05
Prev(%)	58.33	22.98	62.50	11.77	32.71	100.00	100.00	75.00	92.00	96.24	0.90	0	0	0	0	0	0.51	2.91

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