HOMD ::Genus:Filifactor

Genus: Filifactor

Full Lineage: Bacteria; Bacillota; Clostridia; Peptostreptococcales; Filifactoraceae; Filifactor
Lower rank member(s): [Species:Filifactor alocis]

LINKS: Ecology Home | Life Page: Filifactor

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping ND:Erenv1v3 Eren V3-V5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Genus: Filifactor

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.07	0.02	0.66	0.01	0.01	0	0.05	0.01	0.11	0.01	0	0	0	0.02	0	0	0.01	0
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0	0	0	0	0	0	0.02	0.01	0	0	0	0	0	0.02	0	0	0	0
90^thp	0.17	0.03	1.74	0.04	0.02	0	0.09	0.02	0.12	0.03	0	0	0	0.02	0.01	0	0.01	0
Stdev	0.14	0.05	0.88	0.02	0.02	0	0.04	0.01	0.32	0.01	0.01	0	0.01	0	0.01	0	0.02	0
Prev(%)	12.50	8.10	45.83	0	0.31	0	0	0	22.73	5.20	0	0	0	0	0	0	0	0

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.09	0.02	0	0.01	0	0.03	0.03	0.09	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.23	0.04	0	0.01	0	0.13	0.03	0.13	0	0
Stdev	0.33	0.07	0.01	0.02	0.01	0.08	0.14	0.30	0.01	0
Prev(%)	18.92	11.49	2.03	10.81	4.73	22.97	16.22	22.30	4.05	0

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0	0	0	0	0.03	0.07	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0	0	0.06	0.11	0	0	0	0	0	0	0	0	0	0
Stdev	0	0	0	0	0	0	0.10	0.28	0	0	0	0	0	0	0	0	0	0
Prev(%)	0	0	0	0	0	0	19.34	30.00	0	0	0	0	0	0	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0	0	0	0	0	0.12	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0	0	0	0.33	0	0	0	0	0	0	0	0	0	0
Stdev	0	0	0	0	0	0	0	0.32	0	0	0	0	0	0	0	0	0	0
Prev(%)	0	0	0	0	0	0	0	32.36	0	0	0	0	0	0	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.10	0	0	0.03	0.01	0	0.02	0.21	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.09	0.01	0	0.09	0.02	0.01	0.04	0.41	0	0
Stdev	0.40	0.01	0.01	0.10	0.04	0.01	0.04	0.69	0	0
Prev(%)	27.03	20.59	11.63	28.57	32.14	26.00	30.30	38.71	10.00	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.05	0.01	0.76	0	0.01	0	0.02	0.17	0.12	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.13	0.01	2.00	0	0	0	0.09	0.45	0.22	0	0	0	0	0	0	0	0	0
Stdev	0.14	0.06	1.05	0.01	0.04	0	0.04	0.51	0.38	0.01	0	0	0	0	0	0	0	0
Prev(%)	25.00	10.35	50.00	5.88	4.52	0	25.00	18.75	36.00	7.28	0	0	0	0	0	0	0	0

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