HOMD ::Species:Fusobacterium sp. HMT-248

Species: Fusobacterium sp. HMT-248 (HMT-0248) Primary Body Site: Oral

Full Lineage: Bacteria; Fusobacteriota; Fusobacteriia; Fusobacteriales; Fusobacteriaceae; Fusobacterium; Fusobacterium sp. HMT-248

LINKS: Ecology Home | HMT-0248: [Body Sites Data] [Taxon Description] | Life Page: Fusobacterium sp. HMT-248

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 ND:Metaphlan Dewhirst 35x9

No Available Datasets for Species: Fusobacterium sp. HMT-248

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.02	0.02	0.01	1.15	0.04	0.01	0.05	0.06	0.05	0.03	0	0	0	0.01	0	0	0	0
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0.01	0	0	0	0	0.01	0.01	0.03	0.01	0	0	0	0	0.01	0	0	0	0
90^thp	0.04	0.04	0.03	2.30	0.04	0.01	0.13	0.10	0.10	0.08	0	0	0	0.01	0	0.01	0.01	0
Stdev	0.01	0.02	0.01	3.15	0.25	0	0.07	0.03	0.04	0.04	0.01	0	0	0	0	0.01	0.01	0
Prev(%)	0	1.52	0	33.33	2.79	0	12.50	14.29	4.55	0.95	0	0	0	0	0	0	0	0

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.01	0.01	1.04	0.01	0.01	0.03	0.02	0.02	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0.18	0	0	0.06	0.04	0.01	0	0
Stdev	0.03	0.04	3.75	0.03	0.07	0.10	0.06	0.09	0.01	0
Prev(%)	6.49	3.90	14.29	9.09	5.20	11.69	12.99	10.39	6.49	0

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.01	0	0.50	0.01	0.01	0.02	0.02	0.03	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0.03	0	0	0.05	0	0	0	0
Stdev	0.04	0.04	2.16	0.04	0.04	0.08	0.08	0.26	0.01	0
Prev(%)	4.05	4.05	11.49	6.76	6.76	12.16	9.46	10.13	4.73	0

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0.46	0.01	0.01	0.01	0	0.01	0.01	0.01	0	0	0.01	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0	0	0	0.01	0	0	0	0	0	0	0	0	0	0
Stdev	0.02	0	2.02	0.04	0.06	0.03	0.03	0.07	0.05	0.13	0.01	0	0.15	0	0	0	0	0
Prev(%)	5.96	0	9.79	7.53	6.71	5.38	5.95	11.33	6.45	3.00	2.30	0	4.02	0	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0.01	0.66	0.07	0.02	0.03	0	0.03	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0.40	0.01	0	0.05	0	0.02	0	0	0	0	0	0	0	0	0	0
Stdev	0	0.13	2.52	0.74	0.15	0.14	0	0.24	0	0	0	0	0	0	0	0	0	0
Prev(%)	0	6.34	13.83	10.17	7.42	13.69	0	11.44	0	0	0	0	0	0	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0	0	0.01	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0.01	0	0	0	0	0.01	0	0
Stdev	0	0	0.02	0	0.02	0	0	0.01	0.01	0
Prev(%)	4.05	5.88	16.28	11.43	10.71	16.00	21.21	25.81	12.50	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

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