HOMD ::Species:Gemella sanguinis

Species: Gemella sanguinis (HMT-0757) Primary Body Site: Oral

Download Options

Full Lineage: Bacteria; Bacillota; Bacilli; Caryophanales; Gemellaceae; Gemella; Gemella sanguinis

LINKS: Ecology Home | HMT-0757: [Body Sites Data] [Taxon Description] | Life Page: Gemella sanguinis

Hide Legend

Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

Show Legend

Available Datasets:
HMP Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Species: Gemella sanguinis

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.01	0.02	0.01	0.07	0.20	0.49	0.29	0.54	0.68	0.88	0.06	0.01	0	0.09	0	0	0.01	0.01
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0	0	0	0.02	0.06	0.49	0.13	0.17	0.13	0.14	0	0	0	0.09	0	0	0	0
90^thp	0.02	0.03	0.02	0.13	0.39	0.49	0.46	0.96	1.44	1.92	0.03	0.02	0.01	0.09	0	0.01	0.01	0.01
Stdev	0.01	0.10	0.01	0.04	0.23	0	0.16	0.37	0.59	0.82	0.32	0.01	0	0	0	0.01	0.05	0.06
Prev(%)	0	10.63	0	20.00	34.37	100.00	50.00	100.00	77.27	98.35	3.08	0	0	0	0	0	1.06	0.53

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.01	0.01	0.05	0.23	0.71	0.51	0.68	0.82	1.06	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0.09	0	0.07	0.06	0.10	0
90^thp	0.02	0.03	0.14	0.69	1.56	1.05	1.58	2.16	2.84	0
Stdev	0.01	0.02	0.12	0.35	0.67	0.58	0.85	0.89	1.11	0
Prev(%)	16.88	25.97	41.56	81.82	97.40	88.31	93.51	96.10	96.10	1.30

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

Notes:
Reads equally close to G. haemolysans, G. morbillorum, and G. sanguinis were assigned one-third to each taxon.

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.15	0.15	0.88	1.76	0.83	0.20	0.60	0.52	0.24	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.01	0.01	0.10	0.23	0.17	0.04	0.05	0.05	0.02	0
90^thp	0.27	0.26	1.91	4.05	1.62	0.40	1.54	1.07	0.50	0
Stdev	0.27	0.31	0.89	1.78	0.91	0.16	0.68	0.67	0.24	0
Prev(%)	90.54	90.54	99.32	99.32	99.32	96.62	97.30	97.97	97.30	1.40

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0.01	0.05	0.21	0.67	0.41	0.52	0.62	0.77	0.02	0.02	0.01	0.05	0.08	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0.06	0	0.02	0.04	0.06	0	0	0	0	0	0	0	0	0
90^thp	0	0.03	0.14	0.51	1.47	0.99	1.32	1.41	2.10	0.04	0.02	0.01	0.12	0.12	0	0	0	0
Stdev	0	0.02	0.11	0.34	0.64	0.47	0.62	0.67	0.80	0.06	0.14	0.14	0.16	0.36	0	0	0	0
Prev(%)	0	27.82	53.85	86.30	93.96	85.39	91.07	96.67	99.36	19.00	14.65	11.05	21.26	17.05	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

Notes:
Neither HMT-626 nor HMT-757 were present singularly so these reads were split evenly at these sites (AKE,BMU,MVA,PFO,STO,SUBP).

Some of the reads equidistant from these taxa (046-626-757) are included in HMT-757 because they are too close to differentiate at these sites (AKE,BMU).

Because HMT-626 is not present individually, all equidistant reads were assigned to HMT-757 at these sites (ANA,HPA,LAF,LRC,PTO,RAF,RRC,SAL,SUPP,TDO).Reads equidistant to HMT-626 and HMT-757 were assigned to each taxon in proportion to the abundance of HMT-626 and HMT-757 individually at this body site (THR).

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.25	0.18	4.34	7.45	7.83	1.11	3.00	2.68	1.21	0.16	0.53	0.27	0.58	0.70	0	0.02	0.01	0.01
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.01	0.01	0.53	1.21	1.14	0.17	0.18	0.22	0.14	0	0	0	0	0	0	0	0	0
90^thp	0.41	0.38	9.77	18.06	18.18	2.38	7.74	5.98	2.90	0.38	0.71	0.52	1.16	1.51	0	0.01	0.01	0
Stdev	1.42	0.41	5.05	6.93	8.27	1.12	4.92	4.53	1.37	0.42	2.38	0.96	1.68	1.95	0	0.10	0.16	0.05
Prev(%)	94.07	90.98	99.26	100.00	99.74	97.32	97.51	99.27	99.03	61.69	58.60	54.32	75.17	74.67	0	19.67	18.85	7.30

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.02	0.03	0.34	0.52	0.50	1.41	0.68	0.84	0.97	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0.01	0.04	0.08	0.09	0.08	0.06	0.02	0
90^thp	0.07	0.03	0.90	1.46	1.04	3.32	1.78	2.18	2.40	0.01
Stdev	0.03	0.07	0.71	0.72	0.50	1.56	0.71	1.29	1.03	0.01
Prev(%)	81.08	73.53	100.00	100.00	100.00	100.00	100.00	96.77	100.00	15.00

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0.01	0	0.03	0.18	0.55	0.28	0.38	0.61	0.95	0.01	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0.55	0.08	0	0.05	0.13	0	0	0	0	0	0	0	0
90^thp	0.01	0.02	0	0.09	0.47	0.55	0.52	0.90	1.50	2.19	0	0	0	0	0	0	0	0
Stdev	0.01	0.10	0	0.05	0.34	0	0.20	0.37	0.66	0.98	0.20	0	0	0	0	0	0.03	0.05
Prev(%)	16.67	14.90	0	29.41	73.14	100.00	100.00	75.00	92.00	98.59	1.35	0	0	0	0	0	0.51	0.73

Copyright 2007-2025, The Forsyth Institute
Hosted on Amazon AWS EC2

Body Site Legend: