Species: Haemophilus aegyptius (HMT-0535) Primary Body Site: Pathogen
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LINKS: Ecology Home
| HMT-0535: [Body Sites Data]
[Taxon Description]
| Life Page: Haemophilus aegyptius
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Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Body Site Legend:
| SUBP-- Subgingival Plaque |
| SUPP -- Supragingival Plaque |
| PERIO -- Periodontal |
| AKE -- Attached Keratinized Gingiva |
| BMU -- Buccal Mucosa |
| HPA -- Hard Palate |
| SAL -- Saliva |
| THR -- Throat |
| PTO -- Palatine Tonsils |
| TDO -- Tongue Dorsum |
| ANA -- Anterior Nares |
| LRC -- L_Retroauricular Crease |
| RRC -- R_Retroauricular Crease |
| LAF -- L_Antecubital Fossa |
| RAF -- R_Antecubital Fossa |
| VIN -- Vaginal Introitus |
| MVA -- Mid Vagina |
| PFO -- Posterior Fornix |
| STO -- Stool |
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Human Microbiome Project Mapping (Data from healthy subjects. - not published)
No Notes
| SUBP | SUPP | PERIO | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | RAF | VIN | MVA | PFO | STO | |
| Avg (%) | 0.02 | 0.04 | 0 | 0.46 | 0.38 | 0.26 | 0.14 | 0.02 | 0.16 | 0.04 | 0.01 | 0 | 0.01 | 0.01 | 0 | 0.01 | 0 | 0 |
| n | 24 | 395 | 24 | 15 | 323 | 1 | 8 | 7 | 22 | 423 | 65 | 23 | 30 | 1 | 4 | 8 | 94 | 375 |
| 10thp | 0.01 | 0.01 | 0 | 0.14 | 0.05 | 0.26 | 0.04 | 0 | 0.01 | 0.01 | 0 | 0 | 0 | 0.01 | 0 | 0 | 0 | 0 |
| 90thp | 0.04 | 0.09 | 0.01 | 0.85 | 0.86 | 0.26 | 0.34 | 0.03 | 0.21 | 0.09 | 0.01 | 0.01 | 0 | 0.01 | 0 | 0.03 | 0 | 0 |
| Stdev | 0.03 | 0.04 | 0 | 0.39 | 0.37 | 0 | 0.13 | 0.01 | 0.28 | 0.04 | 0.02 | 0 | 0.03 | 0 | 0 | 0.02 | 0 | 0 |
| Prev(%) | 0 | 2.28 | 0 | 66.67 | 33.44 | 100.00 | 12.50 | 0 | 18.18 | 1.42 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Eren V1-V3 www.pnas.org
(Data from healthy subjects.)
No Notes
Eren V3-V5 www.pnas.org
(Data from healthy subjects.)
Notes:
Reads equally close to H. aegyptius, H. influenzae, and H. sp. HMT 259 were assigned one-third to each taxon.
Reads equally close to H. aegyptius, H. influenzae, and H. sp. HMT 259 were assigned one-third to each taxon.
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
| Avg (%) | 0 | 0 | 0 | 0 | 0 | 0 | 0.09 | 0.01 | 0 | 0 |
| n | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| 10thp | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 90thp | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.02 | 0 | 0 |
| Stdev | 0 | 0 | 0 | 0 | 0 | 0.01 | 0.96 | 0.02 | 0 | 0 |
| Prev(%) | 1.35 | 1.35 | 0.68 | 2.70 | 0 | 8.78 | 10.81 | 15.54 | 2.03 | 0 |
Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)
No Notes
Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)
No Notes
Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)
Notes:
Reads equally close to HMT 259, 535, and 641 were assigned one-third to each taxon.
Reads equally close to HMT 259, 535, and 641 were assigned one-third to each taxon.
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | |
| Avg (%) | 0 | 0 | 0.01 | 0 | 0 | 0 | 0.01 | 0.02 | 0 | 0 |
| n | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| 10thp | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 90thp | 0 | 0 | 0.04 | 0.01 | 0 | 0 | 0.02 | 0.01 | 0 | 0 |
| Stdev | 0 | 0 | 0.02 | 0.01 | 0 | 0 | 0.02 | 0.05 | 0 | 0 |
| Prev(%) | 5.41 | 5.88 | 41.86 | 37.14 | 25.00 | 8.00 | 27.27 | 35.48 | 2.50 | 0 |
Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)
No Notes
